Escherichia coli O84:H7 Trh52 |
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Putative Escherichia coli O84:H7 Trh52 RM systems
Ref: Finton,M.D. et al. unpublished
REBASE ref # 31848
Complete sequence: 4,768,611 bp
GenBank #: CP047600
REBASE acronym: EcoTrh52
Org_num: 46739
All begin GUK18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17685 | restriction endonuclease subunit S | |||
| 17690 | M | M.EcoBU03ORF12810P (100% identity) | M.EcoTrh52ORF17690P | |
| 17695 | S | S.Eco10C14ORF17715P (100% identity) | S.EcoTrh52ORF17690P | |
| 17700 | R | EcoBU03ORF12810P (100% identity) | EcoTrh52ORF17690P | |
| 17705 | DUF45 domain-containing protein | |||
| 17835 | 428 aa hypothetical protein | |||
| ??? | S | S.Eco477ORF2295P (100% identity) | S.EcoTrh52ORF17850P | |
| 17850 | M | M.SflFF71ORF17365P (100% identity) | M.EcoTrh52ORF17850P | |
| 17855 | 128 aa hypothetical protein | |||
| 18105 | 237 aa hypothetical protein | |||
| 18110 | R | EcoBU03ORF13275P (100% identity) | EcoTrh52ORF18120P | |
| 18115 | S | S.EcoBU03ORF13275P (100% identity) | S.EcoTrh52ORF18120P | |
| 18120 | M | M.EcoS6400ORFDP (99% identity) | M.EcoTrh52ORF18120P | |
| 18125 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5405 | drug/metabolite exporter YedA | |||
| 5410 | V | V.SflC32DcmP (74% identity) | V.EcoTrh52DcmP | |
| 5415 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoTrh52DcmP |
| 5420 | phosphohydrolase | |||
| 12095 | DNA-binding transcriptional regulator Fis | |||
| 12100 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoTrh52ORF12100P |
| 12105 | DUF2556 domain-containing protein | |||
| 12695 | ribulose-phosphate 3-epimerase | |||
| 12700 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoTrh52DamP |
| 12705 | cell division protein DamX | |||
| 17865 | AAA domain-containing protein | |||
| 17870 | R | EcoS6400ORFPP (96% identity) | EcoTrh52ORF17870P | |
| 17875 | HNH endonuclease | |||
| 21970 | recombination protein NinB | |||
| 21975 | M | M.EcoSO172ORF24410P (100% identity) | GATC | M.EcoTrh52ORF21975P |
| 21980 | NinE family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17705 | DUF45 domain-containing protein | |||
| 17710 | R | EcoBU03MrrP (100% identity) | EcoTrh52MrrP | |
| 17715 | GIY-YIG nuclease family protein | |||
| 17855 | 128 aa hypothetical protein | |||
| 17860 | R | EcoS6400McrCP (100% identity) | EcoTrh52McrCP | |
| 17865 | R | EcoS6400McrBP (100% identity) | EcoTrh52McrBP | |
| 17870 | HNH endonuclease | |||
| 18120 | N-6 DNA methylase | |||
| 18125 | R | EcoS6400GmrSDP (100% identity) | EcoTrh52GmrDP | |
| 18130 | cell filamentation protein Fic | |||