Escherichia coli FHI_NMBU_10 |
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Putative Escherichia coli FHI_NMBU_10 RM systems
Ref: Finton,M.D. et al. unpublished
REBASE ref # 31830
| Sequence length: | GenBank #: | |
| Chromosome: | 5,304,684 bp | CP046539 |
| plasmid pFHI_NMBU_10_01: | 72,427 bp | CP046540 |
REBASE acronym: EcoBU10
Org_num: 46647
All begin GOE21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13980 | restriction endonuclease subunit M | |||
| 13985 | M | M.EcoS40ORF24345P (100% identity) | RTCANNNNNNCTC | M.EcoBU10ORF13985P |
| 13990 | S | S.EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | S.EcoBU10ORF13985P |
| 13995 | R | EcoP231ORF1540P (100% identity) | RTCANNNNNNCTC | EcoBU10ORF13985P |
| 14005 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 700 | TrmB family transcriptional regulator | |||
| 705 | M | M.Eco17190ORF8700P (100% identity) | M.EcoBU10ORF705P | |
| 725 | Shiga toxin Stx2 subunit A | |||
| 1720 | TrmB family transcriptional regulator | |||
| 1725 | M | M.SflC32ORFBP (100% identity) | M.EcoBU10ORF1725P | |
| 1745 | tellurite resistance protein | |||
| 1795 | 49 aa hypothetical protein | |||
| 1800 | M | M.Eco1317ORF15150P (99% identity) | M.EcoBU10ORF1800P | |
| 1805 | 61 aa hypothetical protein | |||
| 2000 | phosphohydrolase | |||
| 2005 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoBU10DcmP |
| 2010 | V | V.SsoSE61DcmP (100% identity) | V.EcoBU10DcmP | |
| 2015 | drug/metabolite exporter YedA | |||
| 4110 | TrmB family transcriptional regulator | |||
| 4115 | M | M.SflC32ORFBP (99% identity) | M.EcoBU10ORF4115P | |
| 4135 | 74 aa hypothetical protein | |||
| 4190 | 49 aa hypothetical protein | |||
| 4195 | M | M.EcoBU11ORF2010P (98% identity) | M.EcoBU10ORF4195P | |
| 4200 | endopeptidase | |||
| 5910 | SAM-dependent DNA methyltransferase | |||
| 5930 | M | M.EcoBU11ORF2080P (100% identity) | A | M.EcoBU10ORF5930P |
| 5935 | TrmB family transcriptional regulator | |||
| 6820 | LexA family transcriptional regulator | |||
| 6825 | M | M.Ecos32ORF15890P (100% identity) | GATC | M.EcoBU10ORF6825P |
| 6830 | PerC family transcriptional regulator | |||
| 8000 | DUF1737 domain-containing protein | |||
| 8005 | M | M.Eco3121ORFKP (96% identity) | M.EcoBU10ORF8005P | |
| 8010 | TrmB family transcriptional regulator | |||
| 13520 | LexA family transcriptional regulator | |||
| 13525 | M | M.KpnHs33ORF24645P (100% identity) | GATC | M.EcoBU10ORF13525P |
| 13530 | PerC family transcriptional regulator | |||
| 13955 | HNH endonuclease | |||
| 13960 | R | EcoWCTORF19980P (100% identity) | EcoBU10ORF13960P | |
| 13965 | restriction endonuclease | |||
| 19385 | cell division protein DamX | |||
| 19390 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoBU10DamP |
| 19395 | ribulose-phosphate 3-epimerase | |||
| 19940 | DUF2556 domain-containing protein | |||
| 19945 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.EcoBU10ORF19945P |
| 19950 | DNA-binding transcriptional regulator Fis | |||
| 23995 | Hok/Gef family protein | |||
| 24005 | M | M.Eco33C17ORF17445P (100% identity) | M.EcoBU10ORF24005P | |
| 24010 | ribosome-associated translation inhibitor RaiA | |||
| plasmid pFHI_NMBU_10_01 | ||||
| 26115 | 102 aa hypothetical protein | |||
| 26120 | M | M.EcoC09ORF24965P (99% identity) | SAY | M.EcoBU10ORF26120P |
| 26125 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6605 | isocitrate dehydrogenase | |||
| 6610 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoBU10ORF6610P |
| 6615 | site-specific DNA recombinase | |||
| 13960 | HNH endonuclease | |||
| 13965 | R | EcoZ151McrCP (100% identity) | EcoBU10McrCP | |
| 13970 | R | SflSTLE4McrBP (100% identity) | EcoBU10McrBP | |
| 13975 | IS3-like element IS3 family transposase | |||