Xanthomonas citri pv. citri DAR73889 |
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Putative Xanthomonas citri pv. citri DAR73889 RM systems
Ref: Webster,J. et al. Microorganisms 8 (12), E1947 (2020)
REBASE ref # 32514
| Sequence length: | GenBank #: | |
| Chromosome: | 5,222,784 bp | CP060470 |
| plasmid pXAS24: | 24,453 bp | CP060475 |
| plasmid pXAS30: | 30,179 bp | CP060474 |
REBASE acronym: Xci73889
Org_num: 49828
All begin H8Z72_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8610 | phage portal protein | |||
| 8620 | M | M.Xci73909ORF13800P (100% identity) | M.Xci73889ORF8620P | |
| 8625 | transposase | |||
| 9715 | 109 aa hypothetical protein | |||
| 9720 | R | Xsp16ORF12485P (100% identity) | GTCGAC | Xci73889ORF9725P |
| 9725 | M | M.Xsp16ORF12485P (100% identity) | GTCGAC | M.Xci73889ORF9725P |
| 9730 | plasmid-related protein | |||
| 10680 | 283 aa hypothetical protein | |||
| 10685 | M | M.Xsp16ORF11365P (100% identity) | M.Xci73889ORF10685P | |
| 10690 | DNA topoisomerase III | |||
| 11350 | DEAD/DEAH box helicase family protein | |||
| 11355 | M | M.XprArg1ORF21085P (100% identity) | M.Xci73889ORF11355P | |
| 11360 | helix-turn-helix domain-containing protein | |||
| 11430 | DNA topoisomerase III | |||
| 11435 | M | M.XciAW16ORF1697P (100% identity) | M.Xci73889ORF11435P | |
| 11440 | 70 aa hypothetical protein | |||
| 19375 | 244 aa hypothetical protein | |||
| 19380 | M | M.XciAW16ORF4460P (100% identity) | M.Xci73889ORF19380P | |
| 19390 | phage portal protein | |||
| plasmid pXAS24 | ||||
| 24310 | ribbon-helix-helix protein, CopG family | |||
| 24315 | M | M.XciAW16ORF7P (100% identity) | M.Xci73889ORF24315P | |
| 24320 | RM | XciAW16ORF7P (100% identity) | Xci73889ORF24315P | |
| 24325 | 226 aa hypothetical protein | |||
| plasmid pXAS30 | ||||
| 24155 | 88 aa hypothetical protein | |||
| 24160 | M | M.Xci73909ORF23655P (100% identity) | CGGCCG | M.Xci73889ORF24160P |
| 24165 | R | XmaIII (100% identity) | CGGCCG | Xci73889ORF24160P |
| 24170 | antitoxin VbhA family protein | |||
| 24225 | antitoxin VbhA family protein | |||
| 24230 | R | XmaIII (100% identity) | CGGCCG | Xci73889ORF24235P |
| 24235 | M | M.Xci73909ORF23655P (100% identity) | CGGCCG | M.Xci73889ORF24235P |
| 24240 | 84 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5625 | 454 aa hypothetical protein | |||
| 5630 | M | M.Xci73909ORF5645P (100% identity) | M.Xci73889ORF5630P | |
| 5635 | R | Xci73909ORF5645P (91% identity) | Xci73889ORF5630P | |
| 5640 | IS3 family transposase | |||