Shewanella species KX20019 |
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Putative Shewanella species KX20019 RM systems
Ref: Zhang,H. and Li,C. unpublished
REBASE ref # 31667
Complete sequence: 5,306,509 bp
GenBank #: CP068437
REBASE acronym: Ssp19
Org_num: 49162
All begin JK628_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7555 | restriction endonuclease | |||
| 7560 | R | Vtu19109IIP (95% identity) | Ssp19ORF7565P | |
| 7565 | M | M.Vtu19109II (84% identity) | M.Ssp19ORF7565P | |
| 7570 | S | S.Vtu19109II (49% identity) | S.Ssp19ORF7565P | |
| 7575 | restriction system-associated AAA family ATPase | |||
| 21345 | transcription factor | |||
| 21350 | M | M.Vpe19642ORFAP (83% identity) | M.Ssp19ORF21350P | |
| 21355 | S | S.MalBG8ORF3119P (44% identity) | S.Ssp19ORF21350P | |
| 21360 | DUF262 domain-containing protein | |||
| 21365 | DUF262 domain-containing protein | |||
| 21370 | 915 aa hypothetical protein | |||
| 21375 | R | Sfr630ORF180P (84% identity) | Ssp19ORF21350P | |
| 21380 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13240 | 100 aa hypothetical protein | |||
| 13245 | M | M.Sin1489ORF14940P (48% identity) | M.Ssp19ORF13245P | |
| 13250 | 76 aa hypothetical protein | |||
| 21855 | DUF2970 domain-containing protein | |||
| ??? | M | M.SpiWPDamP (94% identity) | M.Ssp19DamP | |
| 21865 | AAA family ATPase | |||
| 23025 | 113 aa hypothetical protein | |||
| 23030 | R | Spe345ORF3849P (87% identity) | Ssp19ORF23030P | |
| 23035 | ATP-dependent RNA helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7550 | recombinase family protein | |||
| 7555 | R | Vta267MrrP (85% identity) | Ssp19MrrP | |
| 7560 | DEAD/DEAH box helicase family protein | |||