Gordonia amarae DSM 43602 |
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Putative Gordonia amarae DSM 43602 RM systems
Ref: Batinovic,S. and Petrovski,S. unpublished
REBASE ref # 29225
Complete sequence: 5,147,008 bp
GenBank #: CP045809
REBASE acronym: Gam43602
Org_num: 47801
All begin GII31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11965 | GlcNAc-PI de-N-acetylase | |||
| 11970 | M | M.Gps371ORF12140P (100% identity) | M.Gam43602ORF11970P | |
| 11975 | S | S.Gps371ORF12140P (100% identity) | S.Gam43602ORF11970P | |
| 11980 | restriction endonuclease | |||
| 11985 | type II toxin-antitoxin system HipA family | |||
| 11990 | helix-turn-helix domain-containing protein | |||
| 11995 | ribbon-helix-helix protein, CopG family | |||
| 12000 | PIN domain-containing protein | |||
| 12005 | R | Gps371ORF12140P (100% identity) | Gam43602ORF11970P | |
| 12010 | 344 aa hypothetical protein | |||
| 21785 | 161 aa hypothetical protein | |||
| 21790 | R | Gps371ORF22160P (100% identity) | Gam43602ORF21790P | |
| 21795 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1025 | DEAD/DEAH box helicase | |||
| 1030 | M | M.Gps371ORF1030P (100% identity) | M.Gam43602ORF1030P | |
| 1035 | 109 aa hypothetical protein | |||
| 2580 | 100 aa hypothetical protein | |||
| 2585 | R | Gps371ORF2595P (99% identity) | Gam43602ORF2590P | |
| 2590 | M | M.Gps371ORF2595P (100% identity) | M.Gam43602ORF2590P | |
| 2595 | acyl-CoA dehydrogenase | |||
| 5435 | helicase | |||
| 5440 | RM | Gps371ORF5455P (99% identity) | Gam43602ORF5440P | |
| 5450 | SDR family NAD(P)-dependent oxidoreductase | |||
| 9955 | helix-turn-helix domain-containing protein | |||
| 9960 | V | V.Gps371ORF10170P (100% identity) | V.Gam43602ORF9965P | |
| 9965 | M | M.Gps371ORF10170P (100% identity) | M.Gam43602ORF9965P | |
| 9970 | R | R1.Gps371ORF10170P (100% identity) | R1.Gam43602ORF9965P | |
| 9975 | R | R2.Gps371ORF10170P (100% identity) | R2.Gam43602ORF9965P | |
| 9980 | 88 aa hypothetical protein | |||
| 10005 | 399 aa hypothetical protein | |||
| 10010 | M | M.Gps371ORF10220P (100% identity) | M.Gam43602ORF10010P | |
| 10015 | V | V.Gps371ORF10220P (100% identity) | V.Gam43602ORF10010P | |
| 10020 | AAA family ATPase | |||
| 10025 | AAA family ATPase | |||
| 10030 | M | M.Gps371ORF10240P (100% identity) | M.Gam43602ORF10030P | |
| 10035 | DUF499 domain-containing protein | |||
| 10040 | ATP-binding protein | |||
| 10045 | PD-(D/E)XK motif protein | |||
| 10050 | R | RspLH20ORF3260P (54% identity) | Gam43602ORF10030P | |
| 10055 | IS3 family transposase | |||
| 13740 | 458 aa hypothetical protein | |||
| 13745 | RM | Gps371ORF13920P (100% identity) | Gam43602ORF13745P | |
| 13750 | 175 aa hypothetical protein | |||
| 16135 | ATP-dependent helicase | |||
| 16140 | RM | Gps371ORF16365P (98% identity) | Gam43602ORF16140P | |
| 16145 | 431 aa hypothetical protein | |||
| 18995 | BREX-1 system phosphatase PglZ type A | |||
| 19000 | S | S.Rsp12038ORF2910P (80% identity) | S.Gam43602ORF19040P | |
| 19005 | RM | RqiJ12ORF220P (18% identity) | Gam43602ORF19040BP | |
| 19010 | 135 aa hypothetical protein | |||
| 19015 | 108 aa hypothetical protein | |||
| 19020 | tyrosine-type recombinase/integrase | |||
| 19025 | 167 aa hypothetical protein | |||
| 19030 | IS1380 family transposase | |||
| 19035 | 145 aa hypothetical protein | |||
| 19040 | RM | Gam43602ORF19040P (100% identity) | Gam43602ORF19040AP | |
| 19045 | BREX system P-loop protein BrxC | |||
| 20025 | methyltransferase domain-containing protein | |||
| ??? | M | M.Gps371ORF20410P (100% identity) | M.Gam43602ORF20030P | |
| 20040 | 279 aa hypothetical protein | |||
| 20705 | aminotransferase class I/II-fold pyridoxal | |||
| ??? | M | M.Gps371ORF21085P (57% identity) | M.Gam43602ORF20720P | |
| 20725 | 175 aa hypothetical protein | |||
| 20800 | DEAD/DEAH box helicase | |||
| 20805 | RM | Gps371ORF21170P (100% identity) | Gam43602ORF20805P | |
| 20810 | M | M.Gps371ORF21170P (100% identity) | M.Gam43602ORF20805P | |
| 20815 | AAA family ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20145 | 63 aa hypothetical protein | |||
| 20150 | M | M.RaeN1ORF28135P (80% identity) | M.Gam43602ORF20150P | |
| 20155 | R | GteJC02ORF23845P (90% identity) | Gam43602ORF20150P | |
| 20160 | histidine kinase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15365 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate | |||
| 15370 | R | MscGmrSDP (68% identity) | Gam43602GmrSDP | |
| 15375 | type II toxin-antitoxin system | |||
| 20835 | 182 aa hypothetical protein | |||
| 20840 | R | Gps371McrBP (100% identity) | Gam43602McrBP | |
| 20845 | R | Gps371McrCP (100% identity) | Gam43602McrCP | |
| 20850 | Uma2 family endonuclease | |||