Gordonia amarae BEN372 |
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Putative Gordonia amarae BEN372 RM systems
Ref: Batinovic,S. and Petrovski,S. unpublished
REBASE ref # 32002
Complete sequence: 5,291,543 bp
GenBank #: CP045805
REBASE acronym: Gam372
Org_num: 47799
All begin GII34_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12895 | response regulator | |||
| 12900 | M | M.Gam368ORF13060P (100% identity) | M.Gam372ORF12900P | |
| ??? | S | S.Gam374ORF13105P (100% identity) | S.Gam372ORF12900P | |
| 12910 | DUF262 domain-containing protein | |||
| 12915 | 147 aa hypothetical protein | |||
| 12920 | helix-turn-helix domain-containing protein | |||
| 12925 | DEAD/DEAH box helicase | |||
| 12930 | transposase | |||
| 12935 | IS30 family transposase | |||
| 12940 | IS256 family transposase | |||
| 12945 | Rpn family recombination-promoting | |||
| 12950 | 199 aa hypothetical protein | |||
| 12955 | 72 aa hypothetical protein | |||
| 12960 | PIN domain-containing protein | |||
| 12965 | R | Gam374ORF13105P (100% identity) | Gam372ORF12900P | |
| 12970 | 358 aa hypothetical protein | |||
| 22640 | 173 aa hypothetical protein | |||
| 22645 | R | Gam374ORF23180P (100% identity) | Gam372ORF22680P | |
| 22650 | Rpn family recombination-promoting | |||
| 22655 | 139 aa hypothetical protein | |||
| 22660 | 145 aa hypothetical protein | |||
| 22665 | 24 aa hypothetical protein | |||
| 22670 | DUF262 domain-containing protein | |||
| 22675 | S | S.Gam374ORF23180P (100% identity) | S.Gam372ORF22680P | |
| 22680 | M | M.Gam374ORF23180P (100% identity) | M.Gam372ORF22680P | |
| 22685 | 634 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1215 | DUF499 domain-containing protein | |||
| 1220 | M | M.Gam374ORF1220P (100% identity) | M.Gam372ORF1220P | |
| 1225 | 559 aa hypothetical protein | |||
| 1235 | 612 aa hypothetical protein | |||
| 1240 | V | V.Gam374ORF1245P (100% identity) | V.Gam372ORF1245P | |
| 1245 | M | M.Gam374ORF1245P (100% identity) | M.Gam372ORF1245P | |
| 1250 | alpha/beta fold hydrolase | |||
| 2590 | 411 aa hypothetical protein | |||
| 2595 | M | M.Gam374ORF2595P (100% identity) | M.Gam372ORF2595P | |
| 2600 | XRE family transcriptional regulator | |||
| 8985 | DUF3618 domain-containing protein | |||
| 8995 | M | M.Gam374ORF9215P (100% identity) | M.Gam372ORF8995P | |
| 9000 | DUF262 domain-containing protein | |||
| 8995 | modification methylase | |||
| 9000 | R | Gam374ORF9220P (100% identity) | Gam372ORF9000P | |
| 9005 | excinuclease ABC subunit C | |||
| 20255 | acyl-CoA dehydrogenase | |||
| 20260 | M | M.Gam374ORF20760P (100% identity) | M.Gam372ORF20260P | |
| 20265 | R | Gam374ORF20765P (100% identity) | Gam372ORF20260P | |
| 20270 | 101 aa hypothetical protein | |||
| 22195 | 151 aa hypothetical protein | |||
| 22200 | M | M.Gam374ORF22700P (100% identity) | M.Gam372ORF22200P | |
| 22205 | AMP-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12905 | restriction endonuclease subunit S | |||
| 12910 | R | Gam368GmrSDP (100% identity) | Gam372GmrSDP | |
| 12915 | 147 aa hypothetical protein | |||
| 13875 | Bcr/CflA family efflux MFS transporter | |||
| 13880 | R | Gam374McrBP (100% identity) | Gam372McrBP | |
| 13885 | R | Gam374McrCP (100% identity) | Gam372McrCP | |
| 13890 | ammonium transporter | |||