Escherichia coli CV601 |
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Putative Escherichia coli CV601 RM systems
Ref: Tran,T. unpublished
REBASE ref # 31814
Complete sequence: 4,657,252 bp
GenBank #: CP067994
REBASE acronym: EcoV601
Org_num: 46542
All begin JJT18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19260 | adenine/cytosine-specific restriction | |||
| 19265 | R | EcoW25113ORF11385P (100% identity) | AACNNNNNNGTGC | EcoV601ORF19270P |
| 19270 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoV601ORF19270P |
| 19275 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoV601ORF19270P |
| 19280 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1635 | cell division protein DamX | |||
| 1640 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoV601DamP |
| 1645 | ribulose-phosphate 3-epimerase | |||
| 2280 | DUF2556 family protein | |||
| 2285 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoV601ORF2285P |
| 2290 | DNA-binding transcriptional regulator Fis | |||
| 8740 | phosphohydrolase | |||
| 8745 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoV601DcmP |
| 8750 | V | V.SflFF64DcmP (100% identity) | V.EcoV601DcmP | |
| 8755 | drug/metabolite exporter YedA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12925 | isocitrate dehydrogenase | |||
| 12930 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoV601ORF12930P |
| 12935 | site-specific DNA recombinase | |||
| 19255 | GTPase | |||
| 19260 | R | SenHNK130MrrP (100% identity) | EcoV601MrrP | |
| 19265 | type I restriction-modification system | |||
| 19280 | endoribonuclease SymE | |||
| 19285 | R | SenHNK130McrBP (100% identity) | EcoV601McrBP | |
| 19290 | R | SenHNK130McrCP (100% identity) | EcoV601McrCP | |
| 19295 | 906 aa hypothetical protein | |||