Klebsiella variicola AC CHC |
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Putative Klebsiella variicola AC CHC RM systems
Ref: Conte,D. et al. unpublished
REBASE ref # 32024
| Sequence length: | GenBank #: | |
| Chromosome: | 5,827,146 bp | CP066870 |
| plasmid p1: | 191,630 bp | CP066871 |
| plasmid p8: | 20,234 bp | CP066880 |
REBASE acronym: KvaCHC
Org_num: 48044
All begin JIK52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 27685 | IS1 family transposase | |||
| 27690 | M | M.KpnI009ORF25540P (100% identity) | M.KvaCHCORF27690P | |
| ??? | S | S.Sma854ORF28755P (12% identity) | S1.KvaCHCORF27690P | |
| 27695 | IS5-like element ISEc68 family transposase | |||
| 27700 | S | S.Sma2637ORF16400P (29% identity) | S2.KvaCHCORF27690P | |
| 27705 | YecA family protein | |||
| 27710 | R | SmaQC11ORF51970P (100% identity) | KvaCHCORF27690P | |
| 27715 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4230 | helix-turn-helix domain-containing protein | |||
| 4235 | M | M.Kpn00267ORFGP (98% identity) | M1.KvaCHCORF4235P | |
| 4240 | M | M.KoxSF1ORF11980P (90% identity) | M2.KvaCHCORF4235P | |
| 4245 | 73 aa hypothetical protein | |||
| 20990 | HNH endonuclease | |||
| 20995 | R | KpnSJ25ORF19010P (98% identity) | KvaCHCORF20995P | |
| 21000 | type VI secretion system tube protein Hcp | |||
| 23310 | cell division protein DamX | |||
| 23315 | M | M.Kvai0DamP (100% identity) | GATC | M.KvaCHCDamP |
| 23320 | ribulose-phosphate 3-epimerase | |||
| 25115 | 73 aa hypothetical protein | |||
| 25120 | M | M.Ror218ORF590P (100% identity) | M.KvaCHCORF25120P | |
| 25125 | 64 aa hypothetical protein | |||
| 25495 | RusA family crossover junction | |||
| 25500 | M | M.Kpn1962ORF1735P (98% identity) | M.KvaCHCORF25500P | |
| 25505 | helix-turn-helix domain-containing protein | |||
| 26630 | 85 aa hypothetical protein | |||
| 26635 | M | M.Ror218ORF7565P (100% identity) | M.KvaCHCORF26635P | |
| 26640 | DNA cytosine methyltransferase | |||
| 26635 | phage N-6-adenine-methyltransferase | |||
| 26640 | M | M.Kpni101ORF1529P (100% identity) | M.KvaCHCORF26640P | |
| 26645 | DUF968 domain-containing protein | |||
| 26655 | TrmB family transcriptional regulator | |||
| 26660 | M | M.Ror218ORF7540P (98% identity) | M.KvaCHCORF26660P | |
| 26665 | type II toxin-antitoxin system HicB family | |||
| 26750 | IS1 family transposase | |||
| 26755 | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.KvaCHCORF26755P |
| 26760 | R | Sen23701ORF24490P (100% identity) | CCWGG | KvaCHCORF26755P |
| 26765 | recombinase family protein | |||
| 26950 | DUF968 domain-containing protein | |||
| 26955 | M | M2.Ror201ORF5890P (100% identity) | M1.KvaCHCORF26955P | |
| 26960 | M | M1.Ror201ORF5890P (100% identity) | M2.KvaCHCORF26955P | |
| 26965 | 85 aa hypothetical protein | |||
| 27065 | phosphohydrolase | |||
| ??? | M | M.KvaN029ORF9220P (100% identity) | CCWGG | M.KvaCHCORF27070P |
| 27075 | V | V.Kvai0ORF1724P (100% identity) | V.KvaCHCORF27070P | |
| 27080 | drug/metabolite exporter YedA | |||
| plasmid p1 | ||||
| 28845 | 73 aa hypothetical protein | |||
| 28850 | M | M.SmaQC11ORF52800P (100% identity) | M.KvaCHCORF28850P | |
| 28855 | 76 aa hypothetical protein | |||
| 29465 | 73 aa hypothetical protein | |||
| 29470 | M | M.SmaQC11ORF52800P (99% identity) | M.KvaCHCORF29470P | |
| 29475 | 76 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25785 | SpnT protein | |||
| 25790 | M | M.SspHRORF22130P (100% identity) | GGCACC | M.KvaCHCORF25790P |
| 25795 | R | Ksp2N3ORFDP (98% identity) | GGCACC | KvaCHCORF25790P |
| 25800 | glutathione ABC transporter permease GsiD | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7430 | 74 aa hypothetical protein | |||
| 7435 | R | KvaE25Mrr2P (100% identity) | KvaCHCMrrP | |
| 7440 | SDR family NAD(P)-dependent oxidoreductase | |||
| plasmid p8 | ||||
| 31320 | IS110 family transposase | |||
| 31325 | R | SmaBWH35McrCP (100% identity) | KvaCHCMcrCP | |
| 31330 | R | SmaBWH35McrBP (100% identity) | KvaCHCMcrBP | |