Elizabethkingia species M8 |
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Putative Elizabethkingia species M8 RM systems
Ref: Cao,G. unpublished
REBASE ref # 28456
Complete sequence: 4,123,895 bp
GenBank #: CP066883
REBASE acronym: EspM8
Org_num: 47241
All begin JCR23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4405 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 4410 | M | M1.EfaWf282ORFFP (86% identity) | M1.EspM8ORF4410P | |
| 4415 | DUF262 domain-containing protein | |||
| 4420 | M | M2.FauII (86% identity) | M2.EspM8ORF4410P | |
| 4425 | S | S.FauII (52% identity) | S.EspM8ORF4410P | |
| 4430 | IS982 family transposase | |||
| 4435 | 199 aa hypothetical protein | |||
| 4440 | R | FauIIP (85% identity) | EspM8ORF4410P | |
| 4445 | helix-turn-helix transcriptional regulator | |||
| 6440 | 116 aa hypothetical protein | |||
| 6445 | S | S3.PmeBin220ORFCP (31% identity) | S3.EspM8ORF6465P | |
| 6450 | tyrosine-type recombinase/integrase | |||
| 6455 | S | S1.AplS8ORFFP (26% identity) | S2.EspM8ORF6465P | |
| 6460 | S | S1.PmeBin224ORFDP (38% identity) | S1.EspM8ORF6465P | |
| 6465 | M | M.Tme700293ORF12085P (68% identity) | M.EspM8ORF6465P | |
| 6470 | R | Pcr1447ORF2690P (61% identity) | EspM8ORF6465P | |
| 6475 | TIR domain-containing protein | |||
| 10750 | 393 aa hypothetical protein | |||
| 10755 | M | M.Ean53ORF1823P (98% identity) | M.EspM8ORF10755P | |
| 10760 | DUF3800 domain-containing protein | |||
| 10765 | 161 aa hypothetical protein | |||
| 10770 | S | S1.Ean53ORF1823P (66% identity) | S1.EspM8ORF10755P | |
| 10775 | S | S1.SspLZ7M1ORFBP (42% identity) | S2.EspM8ORF10755P | |
| 10780 | site-specific integrase | |||
| 10785 | R | Ean53ORF1823P (96% identity) | EspM8ORF10755P | |
| 10805 | DUF3127 domain-containing protein | |||
| 15495 | helix-turn-helix transcriptional regulator | |||
| 15500 | R | AspG270ORFCP (98% identity) | EspM8ORF15505P | |
| ??? | M | M.AspG270ORFCP (99% identity) | M.EspM8ORF15505P | |
| 15510 | S | S.Csp5649ORF10690P (63% identity) | S.EspM8ORF15505P | |
| 15515 | winged helix-turn-helix transcriptional | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 745 | DEAD/DEAH box helicase | |||
| 750 | M | M.Fsp34777ORFFP (78% identity) | M.EspM8ORF750P | |
| 755 | HNH endonuclease | |||
| 750 | DNA adenine methylase | |||
| 755 | R | Eme10588ORF216P (89% identity) | EspM8ORF755P | |
| 760 | (deoxy)nucleoside triphosphate | |||
| 8945 | helix-turn-helix transcriptional regulator | |||
| 8950 | M | Fbr35035ORF14505P (15% identity) | M.EspM8ORF8950P | |
| 8955 | R | Fbr35035ORF14505P (62% identity) | EspM8ORF8950P | |
| 8960 | SIR2 family protein | |||
| 13805 | helix-turn-helix transcriptional regulator | |||
| 13810 | RM | Fsu17707ORFAP (51% identity) | EspM8ORF13810P | |
| 13815 | 86 aa hypothetical protein | |||
| 17240 | helix-turn-helix transcriptional regulator | |||
| 17245 | RM | Cbo19482ORF1732P (98% identity) | CTGAAG | EspM8ORF17250P |
| 17250 | M | M.Cbo19482ORF1733P (98% identity) | CTGAAG | M.EspM8ORF17250P |
| 17255 | 139 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13525 | 395 aa hypothetical protein | |||
| 13530 | R | Sth11429McrBP (81% identity) | EspM8McrBP | |
| 13535 | R | AseS633McrCP (80% identity) | EspM8McrCP | |
| 13540 | site-specific integrase | |||