Salmonella enterica UWI_L96 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica UWI_L96 RM systems
Ref: Maguire,M. et al. unpublished
REBASE ref # 31878
Complete sequence: 4,767,999 bp
GenBank #: CP066318
REBASE acronym: Sen103828
Org_num: 46862
All begin ITK58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19395 | restriction endonuclease | |||
| 19400 | R | SenSE89NORF8080P (100% identity) | Sen103828ORF19405P | |
| 19405 | M | M.SenSE89NORF8080P (100% identity) | M.Sen103828ORF19405P | |
| 19410 | S | S.SenSE89NORF8080P (100% identity) | S.Sen103828ORF19405P | |
| 19415 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1775 | cell division protein DamX | |||
| 1780 | M | M.StyTDamP (100% identity) | GATC | M.Sen103828DamP |
| 1785 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen103828ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 8980 | phosphohydrolase | |||
| 8985 | M | M.SenWDcmP (100% identity) | CCWGG | M.Sen103828DcmP |
| 8990 | V | V.StyUK1DcmP (100% identity) | V.Sen103828DcmP | |
| 8995 | drug/metabolite exporter YedA | |||
| 19545 | restriction endonuclease | |||
| 19550 | M | M.SenS914DndAP (100% identity) | M.Sen103828DndAP | |
| 19555 | DNA phosphorothioation system sulfurtransferase | |||
| 19550 | cysteine desulfurase DndA | |||
| 19555 | M | M.SenS914DndCP (100% identity) | M.Sen103828DndCP | |
| 19560 | DNA sulfur modification protein DndD | |||
| 19555 | DNA phosphorothioation system sulfurtransferase | |||
| 19560 | M | M.SenSE89NDndDP (100% identity) | M.Sen103828DndDP | |
| 19565 | DNA sulfur modification protein DndE | |||
| 19560 | DNA sulfur modification protein DndD | |||
| 19565 | M | M.SenS914DndEP (100% identity) | M.Sen103828DndEP | |
| 19570 | 278 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17070 | 33 aa hypothetical protein | |||
| 17075 | R | SenWC80ORFAP (99% identity) | CAGAG | Sen103828ORF17080P |
| 17080 | M | M.SenSE89NORF22820P (100% identity) | CAGAG | M.Sen103828ORF17080P |
| 17085 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19390 | BrnT family toxin | |||
| 19395 | R | StyUK1MrrP (100% identity) | Sen103828Mrr2P | |
| 19400 | type I restriction-modification system | |||
| 19540 | IS3 family transposase | |||
| 19545 | R | SenS415Mrr2P (100% identity) | Sen103828MrrP | |
| 19550 | cysteine desulfurase DndA | |||