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Putative Salmonella enterica subsp. enterica serovar Derby 14-Sa79 RM systems
Ref: Chen,K. et al. unpublished
REBASE ref # 31882
Complete sequence: 4,901,442 bp
GenBank #: CP066545
REBASE acronym: Sen14Sa79
Org_num: 46896
All begin JF569_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
11485 | 322 aa hypothetical protein | |||
11490 | R | SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | Sen14Sa79ORF11495P |
11495 | M | M.SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | M.Sen14Sa79ORF11495P |
11500 | S | S.SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | S.Sen14Sa79ORF11495P |
11505 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
5630 | drug/metabolite exporter YedA | |||
5635 | V | V.StyUK1DcmP (100% identity) | V.Sen14Sa79DcmP | |
5640 | M | M.SensTJX21DcmP (100% identity) | CCWGG | M.Sen14Sa79DcmP |
5645 | phosphohydrolase | |||
9355 | phage holin, lambda family | |||
9360 | M | M.SensSZL38ORF10585P (100% identity) | M.Sen14Sa79ORF9360P | |
9365 | 92 aa hypothetical protein | |||
9390 | LexA family transcriptional regulator | |||
9395 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Sen14Sa79ORF9395P |
9400 | PerC family transcriptional regulator | |||
11630 | YebC/PmpR family DNA-binding transcriptional | |||
11635 | R | SensTJX21ORF12025P (100% identity) | Sen14Sa79ORF11635P | |
11640 | fosfomycin resistance glutathione transferase | |||
11660 | RM | SensTJX21ORF12050P (100% identity) | Sen14Sa79ORF11660P | |
11665 | DEAD/DEAH box helicase | |||
13240 | LexA family transcriptional regulator | |||
13245 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sen14Sa79ORF13245P |
13250 | helix-turn-helix domain-containing protein | |||
13295 | 173 aa hypothetical protein | |||
13300 | M | M.Sen60804ORF21505P (100% identity) | M.Sen14Sa79ORF13300P | |
13305 | 3-5 exoribonuclease | |||
16960 | cell division protein DamX | |||
16965 | M | M.StyTDamP (100% identity) | GATC | M.Sen14Sa79DamP |
16970 | ribulose-phosphate 3-epimerase | |||
17450 | DUF2556 family protein | |||
17455 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen14Sa79ORF17455P |
17460 | DNA-binding transcriptional regulator Fis | |||
18410 | 55 aa hypothetical protein | |||
18415 | M | M.YpsF1ORFCP (100% identity) | M.Sen14Sa79ORF18415P | |
18420 | thermonuclease family protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
9005 | 33 aa hypothetical protein | |||
9010 | R | StyUK1IP (99% identity) | CAGAG | Sen14Sa79ORF9015P |
9015 | M | M.SensTJX21ORF9690P (100% identity) | CAGAG | M.Sen14Sa79ORF9015P |
9020 | MFS transporter |