Salmonella enterica subsp. enterica serovar Agona CVM 21974 |
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Putative Salmonella enterica subsp. enterica serovar Agona CVM 21974 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
Complete sequence: 4,891,101 bp
GenBank #: CP051402
REBASE acronym: Sen21974
Org_num: 46879
All begin HFQ69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19770 | Fic family protein | |||
| 19775 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen21974ORF19785P |
| 19780 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen21974ORF19785P |
| 19785 | M | M2.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M2.Sen21974ORF19785P |
| 19790 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen21974ORF19785P |
| 19795 | toll/interleukin-1 receptor domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.Sen21974DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen21974ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 13870 | drug/metabolite exporter YedA | |||
| 13875 | V | V.StyUK1DcmP (100% identity) | V.Sen21974DcmP | |
| 13880 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen21974DcmP |
| 13885 | phosphohydrolase | |||
| 15070 | replication endonuclease | |||
| 15075 | M | M.SenSP5ORF2922P (100% identity) | GATC | M.Sen21974ORF15075P |
| 15080 | TraR/DksA family transcriptional regulator | |||
| 19755 | YebC/PmpR family DNA-binding transcriptional | |||
| 19760 | R | SenS12VPHORF11355P (100% identity) | Sen21974ORF19760P | |
| 19765 | fosfomycin resistance glutathione transferase | |||
| 19845 | DUF87 domain-containing protein | |||
| 19850 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen21974ORF19850P |
| 19855 | 97 aa hypothetical protein | |||
| 23380 | 145 aa hypothetical protein | |||
| 23385 | M | M.Kpn70ORF10285P (100% identity) | M.Sen21974ORF23385P | |
| 23390 | 164 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17530 | 33 aa hypothetical protein | |||
| 17535 | R | SenS12VPHORF9140P (100% identity) | CAGAG | Sen21974ORF17540P |
| 17540 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen21974ORF17540P |
| 17545 | MFS transporter | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5540 | 3-5 exonuclease | |||
| 5545 | M | M.Sens24219ORF5575P (100% identity) | M.Sen21974ORF5545P | |
| 5550 | replication endonuclease | |||