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Putative Salmonella enterica subsp. enterica serovar Reading CVM 21978 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
Sequence length: | GenBank #: | |
Chromosome: | 4,872,740 bp | CP051449 |
plasmid p21978-1: | 168,106 bp | CP051451 |
plasmid p21978-2: | 93,550 bp | CP051450 |
REBASE acronym: Sen21978
Org_num: 46921
All begin HFQ72_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
20980 | restriction endonuclease | |||
20985 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen21978ORF20990P |
20990 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen21978ORF20990P |
20995 | S | S.Sens29868ORF20005P (100% identity) | GAGNNNNNNRTAYG | S.Sen21978ORF20990P |
21000 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2205 | DGQHR domain-containing protein | |||
2210 | M | M.Sph9TCWORF31P (100% identity) | M.Sen21978ORF2210P | |
2215 | 59 aa hypothetical protein | |||
6225 | DNA-binding transcriptional regulator Fis | |||
6230 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen21978ORF6230P |
6235 | DUF2556 family protein | |||
6715 | ribulose-phosphate 3-epimerase | |||
6720 | M | M.StyTDamP (100% identity) | GATC | M.Sen21978DamP |
6725 | cell division protein DamX | |||
10600 | phosphohydrolase | |||
10605 | M | M.Sens29868DcmP (100% identity) | CCWGG | M.Sen21978DcmP |
10610 | V | V.StyUK1DcmP (100% identity) | V.Sen21978DcmP | |
10615 | drug/metabolite exporter YedA | |||
15690 | YqaJ viral recombinase family protein | |||
15695 | M | M.SspsA7ORF8410P (100% identity) | GATC | M.Sen21978ORF15695P |
15700 | DUF4060 family protein | |||
21120 | YebC/PmpR family DNA-binding transcriptional | |||
21125 | R | Sens29868ORF20140P (100% identity) | Sen21978ORF21125P | |
21130 | fosfomycin resistance glutathione transferase | |||
21150 | RM | Sens29868ORF20165P (100% identity) | Sen21978ORF21150P | |
21155 | DEAD/DEAH box helicase | |||
22660 | LexA family transcriptional regulator | |||
22665 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sen21978ORF22665P |
22670 | helix-turn-helix domain-containing protein | |||
plasmid p21978-1 | ||||
24965 | 143 aa hypothetical protein | |||
24970 | M | M.YrupYR1ORFCP (100% identity) | M.Sen21978ORF24970P | |
24975 | 100 aa hypothetical protein | |||
plasmid p21978-2 | ||||
23930 | 104 aa hypothetical protein | |||
23935 | M | M.EcoGu016ORF25080P (100% identity) | M.Sen21978ORF23935P | |
23940 | 73 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
18755 | 33 aa hypothetical protein | |||
18760 | R | Sens29868ORF17775P (100% identity) | CAGAG | Sen21978ORF18765P |
18765 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen21978ORF18765P |
18770 | MFS transporter | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
20975 | BrnT family toxin | |||
20980 | R | StyUK1MrrP (100% identity) | Sen21978MrrP | |
20985 | type I restriction-modification system |