Salmonella enterica subsp. enterica serovar Heidelberg CVM 24359 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg CVM 24359 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,792,518 bp | CP051381 |
| plasmid p24359-1: | 235,025 bp | CP051382 |
| plasmid p24359-2: | 112,349 bp | CP051383 |
REBASE acronym: Sen24359
Org_num: 46902
All begin HFS04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19775 | restriction endonuclease | |||
| 19780 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen24359ORF19785P |
| 19785 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen24359ORF19785P |
| 19790 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen24359ORF19785P |
| 19795 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1880 | cell division protein DamX | |||
| 1885 | M | M.StyTDamP (100% identity) | GATC | M.Sen24359DamP |
| 1890 | ribulose-phosphate 3-epimerase | |||
| 2370 | DUF2556 family protein | |||
| 2375 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen24359ORF2375P |
| 2380 | DNA-binding transcriptional regulator Fis | |||
| 9050 | phosphohydrolase | |||
| 9055 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen24359DcmP |
| 9060 | V | V.StyTDcmP (100% identity) | V.Sen24359DcmP | |
| 9065 | drug/metabolite exporter YedA | |||
| 14130 | YqaJ viral recombinase family protein | |||
| ??? | M | M.SenS321ORF16155P (100% identity) | GATC | M.Sen24359ORF14135P |
| 14140 | DUF4060 family protein | |||
| 19915 | YebC/PmpR family DNA-binding transcriptional | |||
| 19920 | R | Sens12373ORF19550P (100% identity) | Sen24359ORF19920P | |
| 19925 | fosfomycin resistance glutathione transferase | |||
| 19945 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen24359ORF19945P |
| 19950 | DEAD/DEAH box helicase | |||
| plasmid p24359-1 | ||||
| 23985 | thermonuclease family protein | |||
| 23990 | M | M.YpsF1ORFCP (78% identity) | M.Sen24359ORF23990P | |
| 23995 | IS66 family transposase | |||
| 24020 | DNA-binding protein | |||
| 24025 | M | M.YpsF1ORFDP (100% identity) | M.Sen24359ORF24025P | |
| 24030 | 277 aa hypothetical protein | |||
| plasmid p24359-2 | ||||
| 24625 | 104 aa hypothetical protein | |||
| 24630 | M | M.SspPIBORF23080P (100% identity) | M.Sen24359ORF24630P | |
| 24635 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17200 | 33 aa hypothetical protein | |||
| 17205 | R | Sens12373ORF17180P (100% identity) | CAGAG | Sen24359ORF17210P |
| 17210 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen24359ORF17210P |
| 17215 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19770 | BrnT family toxin | |||
| 19775 | R | StyUK1MrrP (100% identity) | Sen24359MrrP | |
| 19780 | type I restriction-modification system | |||