Salmonella enterica subsp. enterica serovar Newport CVM 24374 |
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Putative Salmonella enterica subsp. enterica serovar Newport CVM 24374 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
Complete sequence: 4,644,025 bp
GenBank #: CP051372
REBASE acronym: Sen24374
Org_num: 46917
All begin HFS12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2455 | endoribonuclease SymE | |||
| 2460 | S | S.SenS224ORF19910P (100% identity) | GACNNNNNNNRTCC | S.Sen24374ORF2465P |
| 2465 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.Sen24374ORF2465P |
| 2470 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | Sen24374ORF2465P |
| 2475 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2325 | DNA primase | |||
| 2330 | R | SenS224ORF20045P (100% identity) | Sen24374ORF2330P | |
| 2335 | YebC/PmpR family DNA-binding transcriptional | |||
| 8230 | 82 aa hypothetical protein | |||
| ??? | M | M.SenNORF1143P (100% identity) | M.Sen24374ORF8235P | |
| 8245 | 112 aa hypothetical protein | |||
| 13075 | drug/metabolite exporter YedA | |||
| 13080 | V | V.StyTDcmP (100% identity) | V.Sen24374DcmP | |
| 13085 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen24374DcmP |
| 13090 | phosphohydrolase | |||
| 19190 | replication endonuclease | |||
| 19195 | M | M.SenS976ORF3185P (100% identity) | M.Sen24374ORF19195P | |
| 19200 | DUF3850 domain-containing protein | |||
| 20080 | DNA-binding transcriptional regulator Fis | |||
| 20085 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen24374ORF20085P |
| 20090 | DUF2556 family protein | |||
| 20570 | ribulose-phosphate 3-epimerase | |||
| 20575 | M | M.StyTDamP (100% identity) | GATC | M.Sen24374DamP |
| 20580 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4665 | MFS transporter | |||
| 4670 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen24374ORF4670P |
| 4675 | R | Ssp6947IIP (100% identity) | CAGAG | Sen24374ORF4670P |
| 4680 | 33 aa hypothetical protein | |||