Salmonella enterica subsp. enterica serovar Derby CVM 30155 |
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Putative Salmonella enterica subsp. enterica serovar Derby CVM 30155 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,865,042 bp | CP053048 |
| plasmid p30155-1: | 224,991 bp | CP053049 |
REBASE acronym: Sen30155
Org_num: 46897
All begin HFS97_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1935 | cell division protein DamX | |||
| 1940 | M | M.StyTDamP (100% identity) | GATC | M.Sen30155DamP |
| 1945 | ribulose-phosphate 3-epimerase | |||
| 2425 | DUF2556 family protein | |||
| 2430 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen30155ORF2430P |
| 2435 | DNA-binding transcriptional regulator Fis | |||
| 8975 | phosphohydrolase | |||
| 8980 | M | M.SenS686DcmP (100% identity) | CCWGG | M.Sen30155DcmP |
| 8985 | V | V.StyUK1DcmP (100% identity) | V.Sen30155DcmP | |
| 8990 | drug/metabolite exporter YedA | |||
| 17195 | phage holin, lambda family | |||
| 17200 | M | M.SensSZL38ORF10585P (100% identity) | M.Sen30155ORF17200P | |
| 17205 | 92 aa hypothetical protein | |||
| 17230 | LexA family transcriptional regulator | |||
| 17235 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Sen30155ORF17235P |
| 17240 | PerC family transcriptional regulator | |||
| 19530 | BREX system P-loop protein BrxC | |||
| 19535 | RM | Sen35215ORF5685P (100% identity) | Sen30155ORF19535P | |
| 19540 | ATP-binding protein | |||
| 19685 | DUF262 domain-containing protein | |||
| 19690 | M | M.SenTR01mDndEP (100% identity) | M.Sen30155DndEP | |
| 19695 | DNA sulfur modification protein DndD | |||
| 19690 | DNA sulfur modification protein DndE | |||
| 19695 | M | M.Sen35215DndDP (100% identity) | M.Sen30155DndDP | |
| 19700 | DNA phosphorothioation system sulfurtransferase | |||
| 19695 | DNA sulfur modification protein DndD | |||
| 19700 | M | M.SenTR01mDndCP (100% identity) | M.Sen30155DndCP | |
| 19705 | DNA sulfur modification protein DndB | |||
| 19700 | DNA phosphorothioation system sulfurtransferase | |||
| 19705 | M | M.SenTR01mDndBP (100% identity) | M.Sen30155DndBP | |
| 19710 | 97 aa hypothetical protein | |||
| 21275 | LexA family transcriptional regulator | |||
| 21280 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sen30155ORF21280P |
| 21285 | helix-turn-helix domain-containing protein | |||
| plasmid p30155-1 | ||||
| 23750 | 56 aa hypothetical protein | |||
| 23755 | M | M.Sens770ORF21675P (100% identity) | M.Sen30155ORF23755P | |
| 23760 | thermonuclease family protein | |||
| 24320 | DNA-binding protein | |||
| 24325 | M | M.Ype21801ORF197P (100% identity) | M.Sen30155ORF24325P | |
| 24330 | 273 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16855 | 33 aa hypothetical protein | |||
| 16860 | R | Sen35215ORF2860P (100% identity) | CAGAG | Sen30155ORF16865P |
| 16865 | M | M.SspZ69ORF17325P (100% identity) | CAGAG | M.Sen30155ORF16865P |
| 16870 | MFS transporter | |||