Mycoplasma bovis VK3 |
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Putative Mycoplasma bovis VK3 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 973,856 bp
GenBank #: CP058520
REBASE acronym: MboVK3
Org_num: 48502
All begin HYD45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1045 | 62 aa hypothetical protein | |||
| 1050 | M | M.Mbos183ORF1030P (98% identity) | M.MboVK3ORF1050P | |
| ??? | S | S1.Mbo201ORF1030P (59% identity) | S1.MboVK3ORF1050P | |
| 1055 | R | Mbos193ORF1135P (100% identity) | MboVK3ORF1050P | |
| 1060 | site-specific integrase | |||
| 1065 | S | S3.Mbo149ORF1055P (100% identity) | S2.MboVK3ORF1050P | |
| 1070 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1670 | DNA polymerase III subunit delta | |||
| 1675 | M | M.Mbo109ORF1725P (100% identity) | CTAG | M.MboVK3ORF1675P |
| 1680 | R | MbosMb1ORF1625P (100% identity) | CTAG | MboVK3ORF1675P |
| 1685 | DUF285 domain-containing protein | |||
| 2155 | 150 aa hypothetical protein | |||
| 2160 | M | M.MbosMb1ORF2105P (100% identity) | M.MboVK3ORF2160P | |
| 2165 | excinuclease ABC subunit UvrB | |||
| 2565 | 30S ribosomal protein S2 | |||
| 2570 | M | M.Mbo229ORF2690P (97% identity) | M.MboVK3ORF2570P | |
| 2575 | variable surface lipoprotein | |||
| 3015 | 62 aa hypothetical protein | |||
| 3020 | M | M.Mbo37ORF3090P (100% identity) | M.MboVK3ORF3020P | |
| 3025 | ribonuclease HIII | |||
| 3285 | AAA family ATPase | |||
| 3290 | R | MboVK5ORF3390P (94% identity) | MboVK3ORF3300P | |
| ??? | DNA adenine methylase | |||
| 3300 | M | M2.MbosMb1ORF3285P (100% identity) | GCATC | M.MboVK3ORF3300P |
| 3305 | 30S ribosomal protein S16 | |||
| 3290 | AlwI family type II restriction endonuclease | |||
| ??? | M | M.MbosMb1ORF3285P (100% identity) | M.MboVK3ORF3295P | |
| 3300 | DNA adenine methylase | |||
| 3510 | YigZ family protein | |||
| 3520 | R | R2.MboTO19ORF3630P (99% identity) | GANTC | R2.MboVK3ORF3525P |
| 3525 | M | M.MboVK5ORF3625P (100% identity) | GANTC | M.MboVK3ORF3525P |
| 3530 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 800 | IS30 family transposase | |||
| 805 | R | Mbos183ORF785P (100% identity) | MboVK3ORF810P | |
| 810 | M | M1.MboVK12ORF805P (99% identity) | M1.MboVK3ORF810P | |
| ??? | M | M2.Mbos193ORF800P (100% identity) | M2.MboVK3ORF810P | |
| 830 | M | M3.Mbo116ORF785P (99% identity) | M3.MboVK3ORF810P | |
| 835 | trigger factor | |||
| 3400 | Fic family protein | |||
| ??? | M | M1.Mbos194ORF3460P (100% identity) | M1.MboVK3ORF3405P | |
| ??? | M | M2.Mbo201ORF3425P (99% identity) | M2.MboVK3ORF3405P | |
| 3430 | IS3 family transposase | |||