Mycoplasma bovis VK5 |
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Putative Mycoplasma bovis VK5 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 969,244 bp
GenBank #: CP058519
REBASE acronym: MboVK5
Org_num: 48506
All begin HYD46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1090 | variable surface lipoprotein | |||
| 1095 | M | M.Mbo258ORF980P (98% identity) | M.MboVK5ORF1095P | |
| 1100 | 121 aa hypothetical protein | |||
| 1105 | S | S.Mbo108ORF1105P (83% identity) | S1.MboVK5ORF1095P | |
| 1110 | R | MboVK13ORF1150P (100% identity) | MboVK5ORF1095P | |
| 1115 | site-specific integrase | |||
| ??? | S | S2.Mbo6ORF1080P (63% identity) | S2.MboVK5ORF1095P | |
| 1120 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1730 | DNA polymerase III subunit delta | |||
| 1735 | M | M.Mbos193ORF1775P (99% identity) | CTAG | M.MboVK5ORF1735P |
| 1740 | R | MbosMb1ORF1625P (100% identity) | CTAG | MboVK5ORF1735P |
| 1745 | 76 aa hypothetical protein | |||
| 2220 | 150 aa hypothetical protein | |||
| 2225 | M | M.Mbos183ORF2155P (100% identity) | M.MboVK5ORF2225P | |
| 2230 | excinuclease ABC subunit UvrB | |||
| 2635 | 30S ribosomal protein S2 | |||
| 2640 | M | M.Mbo206ORF2695P (95% identity) | M.MboVK5ORF2640P | |
| 2645 | variable surface lipoprotein | |||
| 3100 | 64 aa hypothetical protein | |||
| 3105 | M | M.Mbos193ORF3160P (100% identity) | M.MboVK5ORF3105P | |
| 3110 | ribonuclease HIII | |||
| 3380 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3385 | R | Mbo267ORF3290P (96% identity) | GCATC | MboVK5ORF3390P |
| 3390 | M | M1.Mbos193ORF3440P (100% identity) | GCATC | M1.MboVK5ORF3390P |
| 3395 | M | M.MbosMb1ORF3290P (100% identity) | M2.MboVK5ORF3390P | |
| 3400 | 30S ribosomal protein S16 | |||
| 3610 | YigZ family protein | |||
| 3620 | R | R2.Mbo231ORF3520P (97% identity) | GANTC | R2.MboVK5ORF3625P |
| 3625 | M | M.MboVK3ORF3525P (100% identity) | GANTC | M.MboVK5ORF3625P |
| 3630 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 775 | alpha/beta hydrolase | |||
| 780 | R | Mbos182ORF790P (99% identity) | MboVK5ORF785P | |
| 785 | M | M1.Mbos182ORF790P (100% identity) | M1.MboVK5ORF785P | |
| 790 | M | M2.MboVK26ORF810P (99% identity) | M2.MboVK5ORF785P | |
| 795 | M | M3.Mbo274ORF810P (99% identity) | M3.MboVK5ORF785P | |
| 800 | trigger factor | |||
| 3500 | Fic family protein | |||
| ??? | M | M1.Mbo275ORF3420P (100% identity) | M1.MboVK5ORF3505P | |
| ??? | M | M2.Mbos174ORF3440P (91% identity) | M2.MboVK5ORF3505P | |
| 3530 | IS3 family transposase | |||