Mycoplasma bovis VK6 |
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Putative Mycoplasma bovis VK6 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 985,495 bp
GenBank #: CP058518
REBASE acronym: MboVK6
Org_num: 48507
All begin HYD47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1010 | 270 aa hypothetical protein | |||
| 1015 | M | M.Mbos184ORF1110P (99% identity) | M.MboVK6ORF1015P | |
| 1020 | 66 aa hypothetical protein | |||
| 1025 | S | S1.Mbo268ORF1045P (42% identity) | S1.MboVK6ORF1015P | |
| 1030 | R | Mbos194ORF1025P (100% identity) | MboVK6ORF1015P | |
| 1035 | site-specific integrase | |||
| 1040 | S | S2.Mbo274ORF1020P (100% identity) | S2.MboVK6ORF1015P | |
| 1045 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1645 | DNA polymerase III subunit delta | |||
| 1650 | M | M.MboVK8ORF1730P (100% identity) | CTAG | M.MboVK6ORF1650P |
| 1655 | R | MbosMb1ORF1625P (100% identity) | CTAG | MboVK6ORF1650P |
| 1660 | DUF285 domain-containing protein | |||
| 2125 | 150 aa hypothetical protein | |||
| 2130 | M | M.MbosMb1ORF2105P (100% identity) | M.MboVK6ORF2130P | |
| 2135 | excinuclease ABC subunit UvrB | |||
| 2555 | 30S ribosomal protein S2 | |||
| 2560 | M | M.Mbos179ORF2565P (97% identity) | M.MboVK6ORF2560P | |
| 2565 | variable surface lipoprotein | |||
| 3000 | 62 aa hypothetical protein | |||
| 3005 | M | M.MbosMb1ORF2980P (100% identity) | M.MboVK6ORF3005P | |
| 3010 | ribonuclease HIII | |||
| 3285 | AAA family ATPase | |||
| 3290 | R | MboVK9ORF3400P (96% identity) | GCATC | MboVK6ORF3295P |
| 3295 | M | M1.Mbos184ORF3435P (100% identity) | GCATC | M1.MboVK6ORF3295P |
| 3300 | M | M2.MbosMb1ORF3285P (100% identity) | GCATC | M2.MboVK6ORF3295P |
| 3305 | 30S ribosomal protein S16 | |||
| 3515 | YigZ family protein | |||
| 3525 | R | R2.MboAR4ORF3695P (98% identity) | GANTC | R2.MboVK6ORF3530P |
| 3530 | M | M.MbosMb1ORF3525P (100% identity) | GANTC | M.MboVK6ORF3530P |
| 3535 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 780 | lactate dehydrogenase | |||
| 785 | R | Mbos180ORF795P (100% identity) | MboVK6ORF790P | |
| 790 | M | M1.MboVK24ORF805P (99% identity) | M1.MboVK6ORF790P | |
| ??? | M | M2.MboJ137ORF1785P (100% identity) | M2.MboVK6ORF790P | |
| ??? | M | M3.MboKRB1ORF830P (99% identity) | M3.MboVK6ORF790P | |
| 820 | trigger factor | |||
| 3415 | Fic family protein | |||
| 3420 | M | M1.Mbos183ORF3410P (100% identity) | M1.MboVK6ORF3420P | |
| ??? | M | M2.MboVK9ORF3520P (83% identity) | M2.MboVK6ORF3420P | |
| 3435 | IS3 family transposase | |||