Mycoplasma bovis VK8 |
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Putative Mycoplasma bovis VK8 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 978,665 bp
GenBank #: CP058516
REBASE acronym: MboVK8
Org_num: 48509
All begin HYD49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1090 | 72 aa hypothetical protein | |||
| 1095 | M | M.Mbos193ORF1135P (98% identity) | M.MboVK8ORF1095P | |
| 1100 | S | S1.MbosMb1ORF1005P (91% identity) | S1.MboVK8ORF1095P | |
| 1105 | R | Mbos193ORF1135P (100% identity) | MboVK8ORF1095P | |
| 1110 | site-specific integrase | |||
| 1115 | S | S2.Mbos182ORF1090P (77% identity) | S2.MboVK8ORF1095P | |
| 1120 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1725 | DNA polymerase III subunit delta | |||
| 1730 | M | M.MboVK6ORF1650P (100% identity) | CTAG | M.MboVK8ORF1730P |
| 1735 | R | MbosMb1ORF1625P (100% identity) | CTAG | MboVK8ORF1730P |
| 1740 | DUF285 domain-containing protein | |||
| 2210 | 150 aa hypothetical protein | |||
| 2215 | M | M.Mbos182ORF2215P (100% identity) | M.MboVK8ORF2215P | |
| 2220 | excinuclease ABC subunit UvrB | |||
| 2625 | 30S ribosomal protein S2 | |||
| 2630 | M | M.MboVK3ORF2570P (98% identity) | M.MboVK8ORF2630P | |
| 2635 | variable surface lipoprotein | |||
| 3075 | 63 aa hypothetical protein | |||
| 3080 | M | M.Mbos185ORF3055P (100% identity) | M.MboVK8ORF3080P | |
| 3085 | ribonuclease HIII | |||
| 3350 | AAA family ATPase | |||
| 3355 | R | Mbo267ORF3290P (96% identity) | GCATC | MboVK8ORF3360P |
| 3360 | M | M1.Mbos185ORF3335P (100% identity) | GCATC | M1.MboVK8ORF3360P |
| 3365 | M | M2.MbosMb1ORF3285P (100% identity) | GCATC | M2.MboVK8ORF3360P |
| 3370 | 30S ribosomal protein S16 | |||
| 3575 | YigZ family protein | |||
| 3585 | R | R2.Mbo216ORF3735P (93% identity) | GANTC | R2.MboVK8ORF3590P |
| 3590 | M | M.Mbos179ORF3520P (99% identity) | GANTC | M.MboVK8ORF3590P |
| 3595 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 785 | alpha/beta hydrolase | |||
| 790 | R | MboAR4ORF825P (98% identity) | MboVK8ORF795P | |
| 795 | M | M1.Mbo268ORF800P (98% identity) | M1.MboVK8ORF795P | |
| 800 | M | M2.Mbos194ORF805P (99% identity) | M2.MboVK8ORF795P | |
| 805 | M | M3.MboC70ORF870P (99% identity) | M3.MboVK8ORF795P | |
| 810 | trigger factor | |||
| 3475 | Fic family protein | |||
| 3480 | M | M1.Mbos183ORF3410P (100% identity) | M1.MboVK8ORF3480P | |
| ??? | M | M2.MboVK9ORF3520P (83% identity) | M2.MboVK8ORF3480P | |
| 3495 | IS3 family transposase | |||