Salmonella enterica subsp. enterica serovar London CVM 35153 |
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Putative Salmonella enterica subsp. enterica serovar London CVM 35153 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,682,076 bp | CP051313 |
| plasmid p35153: | 102,373 bp | CP051314 |
REBASE acronym: Sen35153
Org_num: 46911
All begin HFU13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10290 | endoribonuclease SymE | |||
| 10295 | S | S.SenSP5ORF3890P (100% identity) | TAANNNNNNNGTTC | S.Sen35153ORF10300P |
| 10300 | M | M.SenSP5ORF3890P (100% identity) | TAANNNNNNNGTTC | M.Sen35153ORF10300P |
| 10305 | R | SenSP5ORF3890P (100% identity) | TAANNNNNNNGTTC | Sen35153ORF10300P |
| 10310 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1790 | cell division protein DamX | |||
| 1795 | M | M.StyTDamP (100% identity) | GATC | M.Sen35153DamP |
| 1800 | ribulose-phosphate 3-epimerase | |||
| 2280 | DUF2556 family protein | |||
| 2285 | M | M.SenTC177ORF2255P (100% identity) | ATGCAT | M.Sen35153ORF2285P |
| 2290 | DNA-binding transcriptional regulator Fis | |||
| 10165 | DNA primase | |||
| 10170 | R | SenZYXORFBP (100% identity) | Sen35153ORF10170P | |
| 10175 | YebC/PmpR family DNA-binding transcriptional | |||
| 15070 | TraR/DksA family transcriptional regulator | |||
| 15075 | M | M.SenSP5ORF2922P (100% identity) | GATC | M.Sen35153ORF15075P |
| 15080 | replication endonuclease | |||
| 20485 | drug/metabolite exporter YedA | |||
| 20490 | V | V.StyTDcmP (100% identity) | V.Sen35153DcmP | |
| 20495 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen35153DcmP |
| 20500 | phosphohydrolase | |||
| plasmid p35153 | ||||
| 22700 | 73 aa hypothetical protein | |||
| 22705 | M | M.StyR64ORFAP (100% identity) | M.Sen35153ORF22705P | |
| 22710 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12515 | MFS transporter | |||
| 12520 | M | M.SensIBG7b4ORF17175P (100% identity) | CAGAG | M.Sen35153ORF12520P |
| 12525 | R | Ssp6947IIP (100% identity) | CAGAG | Sen35153ORF12520P |
| 12530 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10305 | type I restriction-modification system | |||
| 10310 | R | StyTMrrP (100% identity) | Sen35153MrrP | |
| 10315 | BrnT family toxin | |||