Mycoplasma bovis Mb222 |
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Putative Mycoplasma bovis Mb222 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 1,058,899 bp
GenBank #: CP058496
REBASE acronym: Mbo222
Org_num: 48446
All begin HYD69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4435 | 250 aa hypothetical protein | |||
| 985 | M | M.MbosMb1ORF1005P (100% identity) | M.Mbo222ORF985P | |
| 4440 | S | S1.Mbo239ORF1025P (100% identity) | S1.Mbo222ORF985P | |
| 995 | R | MbosMb1ORF1005P (100% identity) | Mbo222ORF985P | |
| 1000 | site-specific integrase | |||
| 4445 | S | S3.MboRM16ORF1000P (100% identity) | S2.Mbo222ORF985P | |
| 4450 | ATP-binding protein | |||
| 4455 | S | S3.Mbo7VBGORF3440P (99% identity) | S3.Mbo222ORF985P | |
| 4460 | IS3 family transposase | |||
| 4865 | tyrosine-type recombinase/integrase | |||
| 4870 | S | S3.MbosMb1ORF4380P (100% identity) | S3.Mbo222ORF4885P | |
| 4875 | S | S2.MbosMb1ORF4380P (100% identity) | S2.Mbo222ORF4885P | |
| 4880 | S | S1.MbosMb1ORF4380P (100% identity) | S1.Mbo222ORF4885P | |
| 4885 | M | M.MbosMb1ORF4380P (100% identity) | M.Mbo222ORF4885P | |
| 4890 | R | MbosMb1ORF4380P (100% identity) | Mbo222ORF4885P | |
| 2805 | S8 family peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4130 | DEAD/DEAH box helicase | |||
| 4135 | M | M.MbosMb1ORF5230P (100% identity) | M.Mbo222ORF4135P | |
| 4140 | 48 aa hypothetical protein | |||
| 4295 | IS3 family transposase | |||
| 3510 | M | M.MbosMb1ORF3525P (100% identity) | GANTC | M.Mbo222ORF3510P |
| 3505 | R | MbosMb1ORF3525P (100% identity) | GANTC | Mbo222ORF3510P |
| 3495 | YigZ family protein | |||
| 3275 | 30S ribosomal protein S16 | |||
| 3270 | M | M2.MbosMb1ORF3285P (100% identity) | GCATC | M1.Mbo222ORF3270P |
| 3265 | M | M1.MbosMb1ORF3285P (100% identity) | GCATC | M2.Mbo222ORF3270P |
| 4325 | R | R2.MbosMb1ORF3285P (100% identity) | GCATC | Mbo222ORF3270P |
| 3415 | IS3 family transposase | |||
| 1605 | DNA polymerase III subunit delta | |||
| 1610 | M | M.MbosMb1ORF1625P (100% identity) | CTAG | M.Mbo222ORF1610P |
| 1615 | R | MbosMb1ORF1625P (100% identity) | CTAG | Mbo222ORF1610P |
| 1620 | BspA family leucine-rich repeat surface protein | |||
| 2090 | 150 aa hypothetical protein | |||
| 2095 | M | M.MbosMb1ORF2105P (100% identity) | M.Mbo222ORF2095P | |
| 2100 | excinuclease ABC subunit UvrB | |||
| 4720 | 63 aa hypothetical protein | |||
| ??? | M | M.Mbo918ORFGP (100% identity) | M.Mbo222ORF4730P | |
| 4735 | HNH endonuclease | |||
| 2525 | 30S ribosomal protein S2 | |||
| 2530 | M | M.MboXBY01ORFBP (100% identity) | GATC | M.Mbo222ORF2530P |
| 2535 | variable surface lipoprotein | |||
| 2995 | 85 aa hypothetical protein | |||
| 3000 | M | M.MbosMb1ORF2980P (100% identity) | CATG | M.Mbo222ORF3000P |
| 3005 | ribonuclease HIII | |||
| 3255 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3260 | R | Mbo152ORF3470P (92% identity) | GCATC | Mbo222ORF3265P |
| 3265 | M | M1.MboTO19ORF3400P (100% identity) | GCATC | M1.Mbo222ORF3265P |
| 3270 | M | M.MbosMb1ORF3290P (100% identity) | M2.Mbo222ORF3265P | |
| 3275 | 30S ribosomal protein S16 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4310 | IS3 family transposase | |||
| 3405 | M | M1.Mbos175ORF5165P (100% identity) | M1.Mbo222ORF3405P | |
| ??? | M | M1.Mbo918ORFHP (100% identity) | M2.Mbo222ORF3405P | |
| 3385 | Fic family protein | |||
| 790 | alpha/beta hydrolase | |||
| 795 | R | MboVK32ORF830P (100% identity) | Mbo222ORF800P | |
| 800 | M | M.MboXBY01ORFMP (98% identity) | M1.Mbo222ORF800P | |
| 805 | M | M2.Mbos193ORF800P (100% identity) | M2.Mbo222ORF800P | |
| 810 | M | M3.Mbos193ORF800P (100% identity) | M3.Mbo222ORF800P | |
| 815 | trigger factor | |||
| 815 | trigger factor | |||
| 810 | M | M3.MboC72ORF830P (100% identity) | M1.Mbo222ORF810P | |
| ??? | M | M2.Mbos193ORF800P (100% identity) | M2.Mbo222ORF810P | |
| ??? | M | M3.Mbo169ORF815P (99% identity) | M3.Mbo222ORF810P | |
| 795 | R | MbosMb1ORF815P (100% identity) | Mbo222ORF810P | |
| 4930 | 150 aa hypothetical protein | |||
| 3385 | Fic family protein | |||
| ??? | M | M1.Mbos183ORF3410P (100% identity) | M1.Mbo222ORF3390P | |
| ??? | M | M2.MbosMb1ORF3410P (98% identity) | M2.Mbo222ORF3390P | |
| 3415 | IS3 family transposase | |||