Mycoplasma bovis AR4 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Mycoplasma bovis AR4 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 980,826 bp
GenBank #: CP058485
REBASE acronym: MboAR4
Org_num: 48398
All begin HYD80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1145 | 102 aa hypothetical protein | |||
| 1150 | M | M.MboVK13ORF1150P (98% identity) | M.MboAR4ORF1150P | |
| 1155 | S | S1.MboVK27ORF1035P (81% identity) | S1.MboAR4ORF1150P | |
| 1160 | R | Mbos185ORF1045P (100% identity) | MboAR4ORF1150P | |
| 1165 | site-specific integrase | |||
| 1170 | S | S2.MboVK22ORF1020P (49% identity) | S2.MboAR4ORF1150P | |
| 1175 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1785 | DNA polymerase III subunit delta | |||
| 1790 | M | M.Mbos193ORF1775P (100% identity) | CTAG | M.MboAR4ORF1790P |
| 1795 | R | MbosMb1ORF1625P (100% identity) | CTAG | MboAR4ORF1790P |
| 1800 | DUF285 domain-containing protein | |||
| 2270 | 150 aa hypothetical protein | |||
| 2275 | M | M.Mbos185ORF2165P (100% identity) | M.MboAR4ORF2275P | |
| 2280 | excinuclease ABC subunit UvrB | |||
| 2695 | 30S ribosomal protein S2 | |||
| 2700 | M | M.MboXBY01ORFBP (98% identity) | M.MboAR4ORF2700P | |
| 2705 | variable surface lipoprotein | |||
| 3155 | 73 aa hypothetical protein | |||
| 3160 | M | M.Mbos193ORF3160P (100% identity) | M.MboAR4ORF3160P | |
| 3165 | ribonuclease HIII | |||
| 3440 | AAA family ATPase | |||
| 3445 | R | Mbo267ORF3290P (97% identity) | GCATC | MboAR4ORF3450P |
| 3450 | M | M1.Mbos185ORF3335P (100% identity) | GCATC | M1.MboAR4ORF3450P |
| 3455 | M | M2.Mbo16MORF3620P (100% identity) | M2.MboAR4ORF3450P | |
| 3460 | 30S ribosomal protein S16 | |||
| 3680 | YigZ family protein | |||
| 3690 | R | R2.MboVK6ORF3530P (98% identity) | GANTC | R2.MboAR4ORF3695P |
| 3695 | M | M.Mbos185ORF3560P (100% identity) | GANTC | M.MboAR4ORF3695P |
| 3700 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 815 | IS30 family transposase | |||
| 820 | R | Mbo32ORF810P (100% identity) | MboAR4ORF825P | |
| 825 | M | M1.Mbos174ORF775P (99% identity) | M1.MboAR4ORF825P | |
| ??? | M | M2.Mbos193ORF800P (100% identity) | M2.MboAR4ORF825P | |
| ??? | M | M1.MboMJ1ORF825P (98% identity) | M3.MboAR4ORF825P | |
| 855 | trigger factor | |||
| 3565 | Fic family protein | |||
| ??? | M | M1.Mbos183ORF3410P (100% identity) | M1.MboAR4ORF3570P | |
| ??? | M | M2.Mbo225ORF3570P (95% identity) | M2.MboAR4ORF3570P | |
| 3600 | IS3 family transposase | |||