Mycoplasma bovis VK25 |
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Putative Mycoplasma bovis VK25 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 975,054 bp
GenBank #: CP058482
REBASE acronym: MboVK25
Org_num: 48499
All begin HYD83_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1000 | 96 aa hypothetical protein | |||
| 1005 | M | M.Mbo162ORF1005P (98% identity) | M.MboVK25ORF1005P | |
| 1010 | S | S1.Mbo143ORF1105P (48% identity) | S1.MboVK25ORF1005P | |
| 1015 | R | Mbos185ORF1045P (100% identity) | MboVK25ORF1005P | |
| 1020 | site-specific integrase | |||
| 1025 | S | S2.Mbo241ORF1030P (83% identity) | S2.MboVK25ORF1005P | |
| 1030 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1630 | DNA polymerase III subunit delta | |||
| 1635 | M | M.Mbos193ORF1775P (100% identity) | CTAG | M.MboVK25ORF1635P |
| 1640 | R | MbosMb1ORF1625P (100% identity) | CTAG | MboVK25ORF1635P |
| 1645 | DUF285 domain-containing protein | |||
| 2115 | 75 aa hypothetical protein | |||
| 2120 | M | M.Mbos183ORF2155P (100% identity) | M.MboVK25ORF2120P | |
| 2125 | excinuclease ABC subunit UvrB | |||
| 2525 | 30S ribosomal protein S2 | |||
| 2530 | M | M.Mbo143ORF2635P (99% identity) | M.MboVK25ORF2530P | |
| 2535 | variable surface lipoprotein | |||
| 2980 | 64 aa hypothetical protein | |||
| 2985 | M | M.Mbos185ORF3055P (100% identity) | M.MboVK25ORF2985P | |
| 2990 | ribonuclease HIII | |||
| 3245 | AAA family ATPase | |||
| 3250 | R | MboVK5ORF3390P (96% identity) | GCATC | MboVK25ORF3255P |
| 3255 | M | M1.Mbos185ORF3335P (100% identity) | GCATC | M1.MboVK25ORF3255P |
| 3260 | M | M2.MbosMb1ORF3285P (100% identity) | GCATC | M2.MboVK25ORF3255P |
| 3265 | 30S ribosomal protein S16 | |||
| 3475 | YigZ family protein | |||
| 3485 | R | R2.Mbos185ORF3560P (97% identity) | GANTC | R2.MboVK25ORF3490P |
| 3490 | M | M.Mbos185ORF3560P (100% identity) | GANTC | M.MboVK25ORF3490P |
| 3495 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 770 | IS30 family transposase | |||
| 775 | R | Mbos193ORF800P (100% identity) | MboVK25ORF780P | |
| ??? | M | M1.Mbos184ORF800P (76% identity) | M1.MboVK25ORF780P | |
| ??? | M | M1.Mbo191ORFGP (53% identity) | M2.MboVK25ORF780P | |
| 795 | 35 aa hypothetical protein | |||
| ??? | M | M1.MboVK41ORF775P (40% identity) | M3.MboVK25ORF780P | |
| 815 | trigger factor | |||
| 3365 | Fic family protein | |||
| 3370 | M | M1.Mbos183ORF3410P (100% identity) | M1.MboVK25ORF3370P | |
| ??? | M | M2.Mbo229ORF3570P (96% identity) | M2.MboVK25ORF3370P | |
| 3395 | IS3 family transposase | |||