Mycoplasma bovis VK10 |
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Putative Mycoplasma bovis VK10 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 969,233 bp
GenBank #: CP058480
REBASE acronym: MboVK10
Org_num: 48488
All begin HYD85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1100 | variable surface lipoprotein | |||
| 1105 | M | M.Mbos180ORF1000P (98% identity) | M.MboVK10ORF1105P | |
| 1110 | S | S1.MboVK15ORF1050P (82% identity) | S1.MboVK10ORF1105P | |
| 1115 | R | Mbos193ORF1135P (100% identity) | MboVK10ORF1105P | |
| 1120 | site-specific integrase | |||
| 1125 | S | S2.MboVK16ORF1125P (94% identity) | S2.MboVK10ORF1105P | |
| 1130 | DDE-type integrase/transposase/recombinase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1730 | DNA polymerase III subunit delta | |||
| 1735 | M | M.Mbos193ORF1775P (100% identity) | CTAG | M.MboVK10ORF1735P |
| 1740 | R | Mbos185ORF1680P (100% identity) | CTAG | MboVK10ORF1735P |
| 1745 | DUF285 domain-containing protein | |||
| 2225 | 150 aa hypothetical protein | |||
| 2230 | M | M.Mbos183ORF2155P (100% identity) | M.MboVK10ORF2230P | |
| 2235 | excinuclease ABC subunit UvrB | |||
| 2625 | 30S ribosomal protein S2 | |||
| 2630 | M | M.Mbos174ORF2585P (95% identity) | M.MboVK10ORF2630P | |
| 2635 | variable surface lipoprotein | |||
| 3075 | 63 aa hypothetical protein | |||
| 3080 | M | M.Mbos185ORF3055P (100% identity) | M.MboVK10ORF3080P | |
| 3085 | ribonuclease HIII | |||
| 3360 | AAA family ATPase | |||
| ??? | R | Mbo267ORF3290P (95% identity) | MboVK10ORF3380P | |
| 3380 | M | M1.Mbos193ORF3440P (100% identity) | GCATC | M1.MboVK10ORF3380P |
| 3385 | M | M2.Mbos193ORF3440P (98% identity) | M2.MboVK10ORF3380P | |
| 3390 | 30S ribosomal protein S16 | |||
| 3605 | YigZ family protein | |||
| 3615 | R | R2.MboVK41ORF3510P (97% identity) | GANTC | R2.MboVK10ORF3620P |
| 3620 | M | M.Mbos185ORF3560P (100% identity) | GANTC | M.MboVK10ORF3620P |
| 3625 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 775 | IS30 family transposase | |||
| 780 | R | Mbo37ORF815P (100% identity) | MboVK10ORF785P | |
| 785 | M | M1.Mbo158ORF785P (100% identity) | M1.MboVK10ORF785P | |
| ??? | M | M2.MboNADC59ORF875P (98% identity) | M2.MboVK10ORF785P | |
| 805 | M | M3.MboC83ORF810P (99% identity) | M3.MboVK10ORF785P | |
| 810 | trigger factor | |||
| 3495 | Fic family protein | |||
| 3500 | M | M.Mbos175ORF3430P (71% identity) | M1.MboVK10ORF3500P | |
| ??? | M | M2.Mbo272ORF3345P (99% identity) | M2.MboVK10ORF3500P | |
| 3525 | IS3 family transposase | |||