Mycoplasma bovis VK13 |
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Putative Mycoplasma bovis VK13 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 985,787 bp
GenBank #: CP058478
REBASE acronym: MboVK13
Org_num: 48491
All begin HYD87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1145 | 65 aa hypothetical protein | |||
| 1150 | M | M.MboAR4ORF1150P (98% identity) | M.MboVK13ORF1150P | |
| 1155 | restriction endonuclease subunit S | |||
| 1160 | R | MboVK5ORF1095P (100% identity) | MboVK13ORF1150P | |
| 1165 | site-specific integrase | |||
| 1170 | S | S2.Mbos185ORF1045P (78% identity) | S.MboVK13ORF1150P | |
| 1175 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1790 | DNA polymerase III subunit delta | |||
| 1795 | M | M.Mbos188ORF1790P (100% identity) | CTAG | M.MboVK13ORF1795P |
| 1800 | R | Mbos185ORF1680P (100% identity) | CTAG | MboVK13ORF1795P |
| 1805 | 58 aa hypothetical protein | |||
| 2300 | 150 aa hypothetical protein | |||
| 2305 | M | M.Mbos182ORF2215P (100% identity) | M.MboVK13ORF2305P | |
| 2310 | excinuclease ABC subunit UvrB | |||
| 2725 | 30S ribosomal protein S2 | |||
| 2730 | M | M.MboVK15ORF2600P (98% identity) | M.MboVK13ORF2730P | |
| 2735 | variable surface lipoprotein | |||
| 3185 | 62 aa hypothetical protein | |||
| 3190 | M | M.Mbos185ORF3055P (100% identity) | M.MboVK13ORF3190P | |
| 3195 | ribonuclease HIII | |||
| 3495 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3500 | R | Mfbo651ORFDP (49% identity) | GCATC | MboVK13ORF3505P |
| 3505 | M | M1.MboTO19ORF3400P (99% identity) | GCATC | M1.MboVK13ORF3505P |
| 3510 | M | M.MbosMb1ORF3290P (100% identity) | M2.MboVK13ORF3505P | |
| 3515 | 30S ribosomal protein S16 | |||
| 3720 | YigZ family protein | |||
| 3730 | R | R2.Mbo241ORF3545P (98% identity) | GANTC | R2.MboVK13ORF3735P |
| 3735 | M | M.Mbo276ORF3705P (99% identity) | GANTC | M.MboVK13ORF3735P |
| 3740 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 805 | IS30 family transposase | |||
| 810 | R | Mbo140ORF800P (100% identity) | MboVK13ORF815P | |
| ??? | M | M1.Mbo456ORF815P (99% identity) | M1.MboVK13ORF815P | |
| 825 | M | M2.MboVK41ORF775P (99% identity) | M2.MboVK13ORF815P | |
| ??? | M | M2.MboC53ORF920P (99% identity) | M3.MboVK13ORF815P | |
| 840 | trigger factor | |||
| 3620 | Fic family protein | |||
| ??? | M | M1.Mbos193ORF3570P (100% identity) | M1.MboVK13ORF3625P | |
| ??? | M | M2.MbosMb1ORF3410P (96% identity) | M2.MboVK13ORF3625P | |
| 3640 | IS3 family transposase | |||