Mycoplasma bovis VK15 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Mycoplasma bovis VK15 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 975,542 bp
GenBank #: CP058476
REBASE acronym: MboVK15
Org_num: 48493
All begin HYD89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1045 | 52 aa hypothetical protein | |||
| 1050 | M | M.Mbos185ORF1045P (99% identity) | M.MboVK15ORF1050P | |
| 1055 | S | S1.MboVK10ORF1105P (82% identity) | S1.MboVK15ORF1050P | |
| 1060 | R | Mbos193ORF1135P (100% identity) | MboVK15ORF1050P | |
| 1065 | site-specific integrase | |||
| 1070 | S | S2.MboVK19ORF1005P (100% identity) | S2.MboVK15ORF1050P | |
| 1075 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1680 | DNA polymerase III subunit delta | |||
| 1685 | M | M.MboVK27ORF1690P (100% identity) | CTAG | M.MboVK15ORF1685P |
| 1690 | R | Mbos193ORF1775P (100% identity) | CTAG | MboVK15ORF1685P |
| 1695 | DUF285 domain-containing protein | |||
| 2170 | 150 aa hypothetical protein | |||
| 2175 | M | M.Mbos183ORF2155P (100% identity) | M.MboVK15ORF2175P | |
| 2180 | excinuclease ABC subunit UvrB | |||
| 2595 | 30S ribosomal protein S2 | |||
| 2600 | M | M.MboVK19ORF2570P (97% identity) | M.MboVK15ORF2600P | |
| 2605 | variable surface lipoprotein | |||
| 3055 | 63 aa hypothetical protein | |||
| 3060 | M | M.Mbos193ORF3160P (100% identity) | M.MboVK15ORF3060P | |
| 3065 | ribonuclease HIII | |||
| 3335 | AAA family ATPase | |||
| 3340 | R | Mbo6ORF3375P (92% identity) | GCATC | MboVK15ORF3345P |
| 3345 | M | M1.Mbos184ORF3435P (100% identity) | GCATC | M1.MboVK15ORF3345P |
| 3350 | M | M2.MbosMb1ORF3285P (100% identity) | GCATC | M2.MboVK15ORF3345P |
| 3355 | 30S ribosomal protein S16 | |||
| 3580 | YigZ family protein | |||
| 3590 | R | R2.Mbo225ORF3690P (96% identity) | GANTC | R2.MboVK15ORF3595P |
| 3595 | M | M.MboVK11ORF3705P (100% identity) | GANTC | M.MboVK15ORF3595P |
| 3600 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 790 | IS30 family transposase | |||
| 795 | R | MboVK14ORF795P (100% identity) | MboVK15ORF800P | |
| 800 | M | M1.Mbos182ORF790P (100% identity) | M1.MboVK15ORF800P | |
| 805 | M | M2.Mbos193ORF800P (95% identity) | M2.MboVK15ORF800P | |
| 810 | M | M3.MboMJ3ORF815P (99% identity) | M3.MboVK15ORF800P | |
| 815 | trigger factor | |||
| 3460 | Fic family protein | |||
| ??? | M | M1.MboVK27ORF3465P (100% identity) | M1.MboVK15ORF3465P | |
| ??? | M | M2.MboVK27ORF3465P (99% identity) | M2.MboVK15ORF3465P | |
| 3495 | IS3 family transposase | |||