Mycoplasma bovis VK16 |
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Putative Mycoplasma bovis VK16 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 977,470 bp
GenBank #: CP058475
REBASE acronym: MboVK16
Org_num: 48494
All begin HYD90_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1120 | 162 aa hypothetical protein | |||
| 1125 | M | M.Mbos188ORF1155P (96% identity) | M.MboVK16ORF1125P | |
| 1130 | S | S1.Mbo219ORF1150P (100% identity) | S1.MboVK16ORF1125P | |
| 1135 | R | Mbos188ORF1155P (100% identity) | MboVK16ORF1125P | |
| 1140 | site-specific integrase | |||
| 1145 | S | S2.MbosMb1ORF1005P (46% identity) | S2.MboVK16ORF1125P | |
| 1150 | DDE-type integrase/transposase/recombinase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1750 | DNA polymerase III subunit delta | |||
| 1755 | M | M.MbosMb1ORF1625P (100% identity) | CTAG | M.MboVK16ORF1755P |
| 1760 | R | Mbo59ORF1745P (100% identity) | CTAG | MboVK16ORF1755P |
| 1765 | DUF285 domain-containing protein | |||
| 2230 | 150 aa hypothetical protein | |||
| 2235 | M | M.MboRM16ORF2375P (100% identity) | M.MboVK16ORF2235P | |
| 2240 | R | MboRM16ORF2375P (100% identity) | MboVK16ORF2235P | |
| 2245 | excinuclease ABC subunit UvrB | |||
| 2615 | 30S ribosomal protein S2 | |||
| 2620 | M | M.Mbo227ORF2535P (95% identity) | M.MboVK16ORF2620P | |
| 2625 | variable surface lipoprotein | |||
| 3065 | 62 aa hypothetical protein | |||
| 3070 | M | M.Mbos194ORF3060P (100% identity) | M.MboVK16ORF3070P | |
| 3075 | ribonuclease HIII | |||
| 3350 | 55 aa hypothetical protein | |||
| 3355 | R | MboVK41ORF3275P (40% identity) | GCATC | MboVK16ORF3360P |
| 3360 | M | M1.Mbo103ORF3375P (100% identity) | GCATC | M1.MboVK16ORF3360P |
| 3365 | M | M2.Mbos194ORF3335P (73% identity) | M2.MboVK16ORF3360P | |
| 3370 | 30S ribosomal protein S16 | |||
| 3570 | 100 aa hypothetical protein | |||
| 3575 | M | M.MboRM16ORF2550P (100% identity) | GANTC | M.MboVK16ORF3575P |
| 3580 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 785 | IS30 family transposase | |||
| 790 | R | MbosMb1ORF815P (100% identity) | MboVK16ORF795P | |
| 795 | M | M1.Mbos188ORF805P (100% identity) | M1.MboVK16ORF795P | |
| ??? | M | M2.Mbo59ORF775P (100% identity) | M2.MboVK16ORF795P | |
| 810 | M | M3.Mbo304ORF1095P (98% identity) | M3.MboVK16ORF795P | |
| 815 | trigger factor | |||