Mycoplasma bovis VK19 |
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Putative Mycoplasma bovis VK19 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 990,850 bp
GenBank #: CP058474
REBASE acronym: MboVK19
Org_num: 48495
All begin HYD91_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1000 | 225 aa hypothetical protein | |||
| 1005 | M | M.Mbo103ORF1035P (99% identity) | M.MboVK19ORF1005P | |
| ??? | S | S1.Mbo240ORF1045P (92% identity) | S1.MboVK19ORF1005P | |
| 1015 | R | Mbo275ORF1015P (99% identity) | MboVK19ORF1005P | |
| 1020 | site-specific integrase | |||
| 1025 | S | S2.MboVK15ORF1050P (100% identity) | S2.MboVK19ORF1005P | |
| 1030 | S | S3.MbosMb1ORF1005P (13% identity) | S3.MboVK19ORF1005P | |
| 1035 | IS3 family transposase | |||
| 2835 | M | M.MboMb1AORF3025P (42% identity) | M.MboVK19ORF2835P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1645 | DNA polymerase III subunit delta | |||
| 1650 | M | M.MbosMb1ORF1625P (100% identity) | CTAG | M.MboVK19ORF1650P |
| 1655 | R | MbosMb1ORF1625P (100% identity) | CTAG | MboVK19ORF1650P |
| 1660 | DUF285 domain-containing protein | |||
| 2130 | 150 aa hypothetical protein | |||
| 2135 | M | M.MbosMb1ORF2105P (100% identity) | M.MboVK19ORF2135P | |
| 2140 | excinuclease ABC subunit UvrB | |||
| 2565 | 30S ribosomal protein S2 | |||
| 2570 | M | M.Mbo200ORF2585P (98% identity) | M.MboVK19ORF2570P | |
| 2575 | variable surface lipoprotein | |||
| 3020 | 60 aa hypothetical protein | |||
| 3025 | M | M.MbosMb1ORF2980P (98% identity) | M.MboVK19ORF3025P | |
| 3030 | ribonuclease HIII | |||
| 3325 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3330 | R | Mbo147ORF3445P (95% identity) | MboVK19ORF3340P | |
| ??? | DNA adenine methylase | |||
| 3340 | M | M.MbosMb1ORF3290P (100% identity) | M.MboVK19ORF3340P | |
| 3345 | 30S ribosomal protein S16 | |||
| 3330 | AlwI family type II restriction endonuclease | |||
| ??? | M | M.MbosMb1ORF3285P (100% identity) | M.MboVK19ORF3335P | |
| 3340 | DNA adenine methylase | |||
| 3555 | YigZ family protein | |||
| 3565 | R | R2.Mbo98ORF3650P (95% identity) | GANTC | R2.MboVK19ORF3570P |
| 3570 | M | M.Mbos194ORF3575P (98% identity) | GANTC | M.MboVK19ORF3570P |
| 3575 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 785 | IS30 family transposase | |||
| 790 | R | MboVK32ORF830P (100% identity) | MboVK19ORF795P | |
| 795 | M | M1.Mbos182ORF790P (100% identity) | M1.MboVK19ORF795P | |
| 800 | M | M2.MboVK41ORF775P (100% identity) | M2.MboVK19ORF795P | |
| ??? | M | M3.Mbo43682ORF830P (99% identity) | M3.MboVK19ORF795P | |
| 820 | trigger factor | |||
| 3445 | Fic family protein | |||
| ??? | M | M1.Mbos183ORF3410P (100% identity) | M1.MboVK19ORF3450P | |
| ??? | M | M2.MboVK9ORF3520P (100% identity) | M2.MboVK19ORF3450P | |
| 3475 | IS3 family transposase | |||