Mycoplasma bovis VK22 |
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Putative Mycoplasma bovis VK22 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 1,107,830 bp
GenBank #: CP058473
REBASE acronym: MboVK22
Org_num: 48496
All begin HYD92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4200 | IS3 family transposase | |||
| 4205 | S | S4.Mbo287ORF1075P (100% identity) | S3.MboVK22ORF1020P | |
| 4210 | ATP-binding protein | |||
| 4215 | S | S4.Mbo68ORF3565P (98% identity) | S2.MboVK22ORF1020P | |
| 1035 | site-specific integrase | |||
| 1030 | R | MbosMb1ORF1005P (100% identity) | MboVK22ORF1020P | |
| 4220 | S | S1.Mbo216ORF1110P (100% identity) | S1.MboVK22ORF1020P | |
| 1020 | M | M.MbosMb1ORF1005P (100% identity) | M.MboVK22ORF1020P | |
| 4225 | 333 aa hypothetical protein | |||
| 4720 | S8 family peptidase | |||
| 4725 | R | MboXBY01ORFLP (18% identity) | MboVK22ORF4740AP | |
| 4730 | IS3 family transposase | |||
| 4735 | R | MbosMb1ORF4380P (74% identity) | MboVK22ORF4740BP | |
| 4740 | M | M.MbosMb1ORF4380P (100% identity) | M.MboVK22ORF4740P | |
| 4745 | S | S1.MboNADC59ORF1335P (100% identity) | S1.MboVK22ORF4740P | |
| 4750 | S | S2.MbosMb1ORF4380P (100% identity) | S2.MboVK22ORF4740P | |
| ??? | S | S2.MboJ81ORF1210P (100% identity) | S3.MboVK22ORF4740P | |
| 4760 | tyrosine-type recombinase/integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4315 | IS3 family transposase | |||
| 4320 | R | R2.MbosMb1ORF3285P (100% identity) | GCATC | MboVK22ORF3365P |
| 3365 | M | M1.MbosMb1ORF3285P (100% identity) | GCATC | M1.MboVK22ORF3365P |
| 3370 | M | M2.MboP180ORF636P (94% identity) | GCATC | M2.MboVK22ORF3365P |
| 4325 | IS3 family transposase | |||
| 3590 | YigZ family protein | |||
| 3600 | R | MbosMb1ORF3525P (100% identity) | GANTC | MboVK22ORF3605P |
| 3605 | M | M.MbosMb1ORF3525P (100% identity) | GANTC | M.MboVK22ORF3605P |
| 3610 | MFS transporter | |||
| 3080 | ribonuclease HIII | |||
| 3075 | M | M.Mbos184ORF3155P (100% identity) | RCATGY | M.MboVK22ORF3075P |
| 3070 | 103 aa hypothetical protein | |||
| 2600 | variable surface lipoprotein | |||
| 2595 | M | M.MboXBY01ORFBP (100% identity) | GATC | M.MboVK22ORF2595P |
| 2590 | 30S ribosomal protein S2 | |||
| 4880 | HNH endonuclease | |||
| ??? | M | M.MbosMb1ORF4570P (100% identity) | CG | M.MboVK22ORF4885P |
| 4895 | 63 aa hypothetical protein | |||
| 2165 | excinuclease ABC subunit UvrB | |||
| 2160 | M | M.MbosMb1ORF2105P (100% identity) | GCNGC | M.MboVK22ORF2160P |
| 2155 | 150 aa hypothetical protein | |||
| 1680 | BspA family leucine-rich repeat surface protein | |||
| 1675 | R | MbosMb1ORF1625P (100% identity) | CTAG | MboVK22ORF1670P |
| 1670 | M | M.MbosMb1ORF1625P (100% identity) | CTAG | M.MboVK22ORF1670P |
| 1665 | DNA polymerase III subunit delta | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3475 | Fic family protein | |||
| ??? | M | M.MbosMb1ORF5060P (100% identity) | M1.MboVK22ORF3480P | |
| 4350 | M | M2.MbosMb1ORF3410P (16% identity) | M2.MboVK22ORF3480P | |
| 4355 | IS1634-like element ISMbov3 family transposase | |||
| 4360 | M | M2.MbosMb1ORF3410P (37% identity) | M3.MboVK22ORF3480P | |
| 3510 | IS3 family transposase | |||
| 4600 | 140 aa hypothetical protein | |||
| 780 | R | MboXBY01ORFMP (100% identity) | MboVK22ORF785P | |
| 785 | M | M1.MbosMb1ORF815P (66% identity) | M1.MboVK22ORF785BP | |
| 4605 | IS3 family transposase | |||
| 790 | M | M1.MboT10ORFEP (32% identity) | M1.MboVK22ORF785AP | |
| 795 | M | M2.Mbo6ORF795P (99% identity) | M2.MboVK22ORF785P | |
| 810 | M | M3.Mbo274ORF810P (99% identity) | M3.MboVK22ORF785P | |
| 820 | trigger factor | |||