Mycoplasma bovis VK24 |
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Putative Mycoplasma bovis VK24 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 992,078 bp
GenBank #: CP058471
REBASE acronym: MboVK24
Org_num: 48498
All begin HYD94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1080 | 237 aa hypothetical protein | |||
| 1085 | M | M.Mbo75ORF1120P (97% identity) | M.MboVK24ORF1085P | |
| ??? | S | S.MboVK32ORF1055P (93% identity) | S.MboVK24ORF1085P | |
| 1090 | R | Mbos188ORF1155P (100% identity) | MboVK24ORF1085P | |
| 1095 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1715 | DNA polymerase III subunit delta | |||
| 1720 | M | M.Mbos188ORF1790P (100% identity) | CTAG | M.MboVK24ORF1720P |
| 1725 | R | MbosMb1ORF1625P (100% identity) | CTAG | MboVK24ORF1720P |
| 1730 | DUF285 domain-containing protein | |||
| 2195 | 57 aa hypothetical protein | |||
| 2200 | M | M.MbosMb1ORF2105P (100% identity) | M.MboVK24ORF2200P | |
| 2205 | excinuclease ABC subunit UvrB | |||
| 2610 | 30S ribosomal protein S2 | |||
| 2615 | M | M.Mbos193ORF2700P (94% identity) | M.MboVK24ORF2615P | |
| 2620 | variable surface lipoprotein | |||
| 3085 | 62 aa hypothetical protein | |||
| 3090 | M | M.MbosMb1ORF2980P (100% identity) | M.MboVK24ORF3090P | |
| 3095 | ribonuclease HIII | |||
| 3370 | AAA family ATPase | |||
| 3375 | R | Mbo108ORF3400P (92% identity) | GCATC | MboVK24ORF3380P |
| 3380 | M | M1.Mbos184ORF3435P (100% identity) | GCATC | M1.MboVK24ORF3380P |
| 3385 | M | M2.MbosMb1ORF3285P (100% identity) | GCATC | M2.MboVK24ORF3380P |
| 3390 | 30S ribosomal protein S16 | |||
| 3600 | YigZ family protein | |||
| 3610 | R | R2.MboVK41ORF3510P (96% identity) | GANTC | R2.MboVK24ORF3615P |
| 3615 | M | M.Mbos194ORF3575P (100% identity) | GANTC | M.MboVK24ORF3615P |
| 3620 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 795 | IS30 family transposase | |||
| 800 | R | Mbo134ORF800P (99% identity) | MboVK24ORF805P | |
| 805 | M | M1.Mbo219ORF795P (100% identity) | M1.MboVK24ORF805P | |
| 810 | 218 aa hypothetical protein | |||
| 815 | M | M3.Mbo206ORF820P (99% identity) | M2.MboVK24ORF805P | |
| 820 | trigger factor | |||
| 3495 | Fic family protein | |||
| ??? | M | M1.Mbo103ORF3490P (100% identity) | M.MboVK24ORF3500P | |
| 3510 | site-specific DNA-methyltransferase | |||