Mycoplasma bovis VK26 |
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Putative Mycoplasma bovis VK26 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 997,115 bp
GenBank #: CP058469
REBASE acronym: MboVK26
Org_num: 48500
All begin HYD96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1065 | 108 aa hypothetical protein | |||
| 1070 | M | M.Mbo143ORF1105P (99% identity) | M.MboVK26ORF1070P | |
| ??? | S | S1.Mbo152ORF1130P (99% identity) | S1.MboVK26ORF1070P | |
| 1080 | R | Mbos185ORF1045P (100% identity) | MboVK26ORF1070P | |
| 1085 | site-specific integrase | |||
| ??? | S | S2.Mbos185ORF1045P (41% identity) | S2.MboVK26ORF1070P | |
| 1090 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1705 | DNA polymerase III subunit delta | |||
| 1710 | M | M.Mbos193ORF1775P (100% identity) | CTAG | M.MboVK26ORF1710P |
| 1715 | R | MbosMb1ORF1625P (100% identity) | CTAG | MboVK26ORF1710P |
| 1720 | 108 aa hypothetical protein | |||
| 2210 | 75 aa hypothetical protein | |||
| 2215 | M | M.Mbos183ORF2155P (100% identity) | M.MboVK26ORF2215P | |
| 2220 | excinuclease ABC subunit UvrB | |||
| 2630 | 30S ribosomal protein S2 | |||
| 2635 | M | M.MboVK9ORF2665P (99% identity) | M.MboVK26ORF2635P | |
| 2640 | variable surface lipoprotein | |||
| 3105 | 65 aa hypothetical protein | |||
| 3110 | M | M.Mbos184ORF3155P (100% identity) | M.MboVK26ORF3110P | |
| 3115 | ribonuclease HIII | |||
| 3390 | AAA family ATPase | |||
| 3395 | R | Mbo267ORF3290P (91% identity) | GCATC | MboVK26ORF3400P |
| 3400 | M | M1.Mbos185ORF3335P (100% identity) | GCATC | M1.MboVK26ORF3400P |
| 3405 | M | M2.MbosMb1ORF3285P (100% identity) | GCATC | M2.MboVK26ORF3400P |
| 3410 | 30S ribosomal protein S16 | |||
| 3620 | 93 aa hypothetical protein | |||
| ??? | R | R2.Mbos175ORF3540P (61% identity) | GANTC | R2.MboVK26ORF3630P |
| 3630 | M | M.Mbos182ORF3625P (99% identity) | GANTC | M.MboVK26ORF3630P |
| 3635 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 800 | IS30 family transposase | |||
| 805 | R | Mbos193ORF800P (100% identity) | MboVK26ORF810P | |
| 810 | M | M1.Mbos182ORF790P (100% identity) | M1.MboVK26ORF810P | |
| 815 | M | M2.Mbo152ORF815P (99% identity) | M2.MboVK26ORF810P | |
| 820 | M | M3.Mbos179ORF790P (99% identity) | M3.MboVK26ORF810P | |
| 825 | trigger factor | |||
| 3510 | Fic family protein | |||
| 3515 | M | M1.Mbos183ORF3410P (100% identity) | M1.MboVK26ORF3515P | |
| ??? | M | M2.MboVK27ORF3465P (98% identity) | M2.MboVK26ORF3515P | |
| 3530 | IS3 family transposase | |||