Mycoplasma bovis VK27 |
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Putative Mycoplasma bovis VK27 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 989,545 bp
GenBank #: CP058468
REBASE acronym: MboVK27
Org_num: 48501
All begin HYD97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1030 | 66 aa hypothetical protein | |||
| 1035 | M | M.Mbo130ORF1055P (98% identity) | M.MboVK27ORF1035P | |
| 1040 | S | S1.MboVK26ORF1070P (81% identity) | S1.MboVK27ORF1035P | |
| 1045 | R | Mbos185ORF1045P (100% identity) | MboVK27ORF1035P | |
| 1050 | site-specific integrase | |||
| 1055 | S | S2.Mbo241ORF1030P (40% identity) | S2.MboVK27ORF1035P | |
| 1060 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1685 | DNA polymerase III subunit delta | |||
| 1690 | M | M.MboVK15ORF1685P (100% identity) | CTAG | M.MboVK27ORF1690P |
| 1695 | R | MbosMb1ORF1625P (100% identity) | CTAG | MboVK27ORF1690P |
| 1700 | DUF285 domain-containing protein | |||
| 2170 | 150 aa hypothetical protein | |||
| 2175 | M | M.Mbos183ORF2155P (100% identity) | M.MboVK27ORF2175P | |
| 2180 | excinuclease ABC subunit UvrB | |||
| 2605 | 30S ribosomal protein S2 | |||
| 2610 | M | M.MboVK9ORF2665P (97% identity) | M.MboVK27ORF2610P | |
| 2615 | variable surface lipoprotein | |||
| 3055 | 61 aa hypothetical protein | |||
| 3060 | M | M.Mbos184ORF3155P (100% identity) | M.MboVK27ORF3060P | |
| 3065 | ribonuclease HIII | |||
| 3335 | AAA family ATPase | |||
| 3340 | R | MboVK23ORF3390P (93% identity) | GCATC | MboVK27ORF3345P |
| 3345 | M | M1.Mbos184ORF3435P (100% identity) | GCATC | M1.MboVK27ORF3345P |
| 3350 | M | M2.MbosMb1ORF3285P (100% identity) | GCATC | M2.MboVK27ORF3345P |
| 3355 | 30S ribosomal protein S16 | |||
| 3570 | 94 aa hypothetical protein | |||
| 3575 | R | R2.Mbos185ORF3560P (62% identity) | GANTC | R2.MboVK27ORF3580P |
| 3580 | M | M.Mbos185ORF3560P (100% identity) | GANTC | M.MboVK27ORF3580P |
| 3585 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 790 | IS30 family transposase | |||
| 795 | R | Mbos193ORF800P (100% identity) | MboVK27ORF800P | |
| 800 | M | M1.Mbos182ORF790P (100% identity) | M1.MboVK27ORF800P | |
| 805 | M | M2.Mbo158ORF785P (99% identity) | M2.MboVK27ORF800P | |
| 810 | M | M3.Mbo134ORF800P (89% identity) | M3.MboVK27ORF800P | |
| 815 | trigger factor | |||
| 3460 | Fic family protein | |||
| 3465 | M | M1.MboVK15ORF3465P (100% identity) | M1.MboVK27ORF3465P | |
| ??? | M | M2.MboVK15ORF3465P (99% identity) | M2.MboVK27ORF3465P | |
| 3480 | IS3 family transposase | |||