Mycoplasma bovis VK41 |
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Putative Mycoplasma bovis VK41 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 986,732 bp
GenBank #: CP058463
REBASE acronym: MboVK41
Org_num: 48505
All begin HYE02_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 980 | variable surface lipoprotein | |||
| 985 | M | M.Mbo109ORF1075P (98% identity) | M.MboVK41ORF985P | |
| 990 | S | S1.MboVK25ORF1005P (96% identity) | S1.MboVK41ORF985P | |
| 995 | R | Mbos185ORF1045P (100% identity) | MboVK41ORF985P | |
| 1000 | site-specific integrase | |||
| 1005 | S | S2.MboVK8ORF1095P (52% identity) | S2.MboVK41ORF985P | |
| 1010 | 64 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1635 | DNA polymerase III subunit delta | |||
| 1640 | M | M.Mbos185ORF1680P (100% identity) | CTAG | M.MboVK41ORF1640P |
| 1645 | R | MbosMb1ORF1625P (100% identity) | CTAG | MboVK41ORF1640P |
| 1650 | DUF285 domain-containing protein | |||
| 2120 | 150 aa hypothetical protein | |||
| 2125 | M | M.Mbos185ORF2165P (100% identity) | M.MboVK41ORF2125P | |
| 2130 | excinuclease ABC subunit UvrB | |||
| 2525 | 30S ribosomal protein S2 | |||
| 2530 | M | M.Mbos193ORF2700P (94% identity) | M.MboVK41ORF2530P | |
| 2535 | variable surface lipoprotein | |||
| 2990 | 63 aa hypothetical protein | |||
| 2995 | M | M.MboTO19ORF3100P (99% identity) | M.MboVK41ORF2995P | |
| 3000 | ribonuclease HIII | |||
| 3265 | AAA family ATPase | |||
| 3270 | R | MboVK19ORF3340P (92% identity) | GCATC | MboVK41ORF3275P |
| 3275 | M | M1.Mbos185ORF3335P (100% identity) | GCATC | M1.MboVK41ORF3275P |
| 3280 | M | M2.MbosMb1ORF3285P (100% identity) | GCATC | M2.MboVK41ORF3275P |
| 3285 | 30S ribosomal protein S16 | |||
| 3495 | YigZ family protein | |||
| 3505 | R | R2.MboVK10ORF3620P (97% identity) | GANTC | R2.MboVK41ORF3510P |
| 3510 | M | M.Mbos185ORF3560P (100% identity) | GANTC | M.MboVK41ORF3510P |
| 3515 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 765 | IS30 family transposase | |||
| 770 | R | Mbos193ORF800P (100% identity) | MboVK41ORF775P | |
| ??? | M | M4.Mbo216ORF5200P (40% identity) | M1.MboVK41ORF775P | |
| 780 | M | M1.MboVK41ORF775P (32% identity) | M2.MboVK41ORF775P | |
| ??? | M | M1.MboVK41ORF775P (32% identity) | M3.MboVK41ORF775P | |
| 795 | trigger factor | |||
| 3385 | Fic family protein | |||
| ??? | M | M1.Mbos194ORF3460P (100% identity) | M1.MboVK41ORF3390P | |
| ??? | M | M2.MboVK15ORF3465P (97% identity) | M2.MboVK41ORF3390P | |
| 3415 | IS3 family transposase | |||