Mycoplasma bovis VK32 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Mycoplasma bovis VK32 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 995,780 bp
GenBank #: CP058462
REBASE acronym: MboVK32
Org_num: 48504
All begin HYE03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1050 | 221 aa hypothetical protein | |||
| 1055 | M | M.Mbo116ORF1080P (98% identity) | M.MboVK32ORF1055P | |
| ??? | S | S.MboVK24ORF1085P (93% identity) | S.MboVK32ORF1055P | |
| 1060 | R | Mbos184ORF1110P (100% identity) | MboVK32ORF1055P | |
| 1065 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1685 | DNA polymerase III subunit delta | |||
| 1690 | M | M.Mbos188ORF1790P (100% identity) | CTAG | M.MboVK32ORF1690P |
| 1695 | R | MbosMb1ORF1625P (100% identity) | CTAG | MboVK32ORF1690P |
| 1700 | DUF285 domain-containing protein | |||
| 2175 | 150 aa hypothetical protein | |||
| 2180 | M | M.MbosMb1ORF2105P (100% identity) | M.MboVK32ORF2180P | |
| 2185 | excinuclease ABC subunit UvrB | |||
| 2610 | 30S ribosomal protein S2 | |||
| 2615 | M | M.Mbos194ORF2595P (95% identity) | M.MboVK32ORF2615P | |
| 2620 | variable surface lipoprotein | |||
| 3070 | 62 aa hypothetical protein | |||
| 3075 | M | M.MbosMb1ORF2980P (100% identity) | M.MboVK32ORF3075P | |
| 3080 | ribonuclease HIII | |||
| 3380 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3385 | R | Mbos179ORF3285P (93% identity) | MboVK32ORF3395P | |
| ??? | DNA adenine methylase | |||
| 3395 | M | M.MbosMb1ORF3290P (100% identity) | M.MboVK32ORF3395P | |
| 3400 | 30S ribosomal protein S16 | |||
| 3385 | AlwI family type II restriction endonuclease | |||
| ??? | M | M.MbosMb1ORF3285P (100% identity) | M.MboVK32ORF3390P | |
| 3395 | DNA adenine methylase | |||
| 3620 | 93 aa hypothetical protein | |||
| 3625 | R | R2.Mbos193ORF3690P (63% identity) | GANTC | R2.MboVK32ORF3630P |
| 3630 | M | M.MbosMb1ORF3525P (100% identity) | GANTC | M.MboVK32ORF3630P |
| 3635 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 820 | IS30 family transposase | |||
| 825 | R | MboVK19ORF795P (100% identity) | MboVK32ORF830P | |
| 830 | M | M1.MboVK14ORF795P (99% identity) | M1.MboVK32ORF830P | |
| ??? | M | M2.Mbos193ORF800P (100% identity) | M2.MboVK32ORF830P | |
| 850 | M | M3.Mbos188ORF805P (99% identity) | M3.MboVK32ORF830P | |
| 855 | trigger factor | |||
| 3500 | Fic family protein | |||
| ??? | M | M.MbosMb1ORF5060P (100% identity) | M1.MboVK32ORF3505P | |
| ??? | M | M2.Mbo231ORF3405P (97% identity) | M2.MboVK32ORF3505P | |
| 3530 | IS3 family transposase | |||