Mycoplasma bovis VK12 |
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Putative Mycoplasma bovis VK12 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 991,698 bp
GenBank #: CP058461
REBASE acronym: MboVK12
Org_num: 48490
All begin HYE04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1130 | 222 aa hypothetical protein | |||
| 1135 | M | M.Mbo237ORF1115P (97% identity) | M.MboVK12ORF1135P | |
| 1140 | S | S1.Mbo214ORF1100P (85% identity) | S1.MboVK12ORF1135P | |
| 1145 | R | Mbos185ORF1045P (100% identity) | MboVK12ORF1135P | |
| 1150 | site-specific integrase | |||
| ??? | S | S3.MboVK12ORF1135P (86% identity) | S2.MboVK12ORF1135P | |
| ??? | S | S2.MboVK12ORF1135P (86% identity) | S3.MboVK12ORF1135P | |
| 1160 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1775 | DNA polymerase III subunit delta | |||
| 1780 | M | M.Mbos193ORF1775P (100% identity) | CTAG | M.MboVK12ORF1780P |
| 1785 | R | MbosMb1ORF1625P (100% identity) | CTAG | MboVK12ORF1780P |
| 1790 | DUF285 domain-containing protein | |||
| 2275 | 150 aa hypothetical protein | |||
| ??? | M | M.Mbo258ORF2095P (97% identity) | M.MboVK12ORF2280P | |
| 2285 | excinuclease ABC subunit UvrB | |||
| 2710 | 30S ribosomal protein S2 | |||
| 2715 | M | M.Mbos188ORF2715P (99% identity) | M.MboVK12ORF2715P | |
| 2720 | variable surface lipoprotein | |||
| 3185 | 63 aa hypothetical protein | |||
| 3190 | M | M.Mbos193ORF3160P (100% identity) | M.MboVK12ORF3190P | |
| 3195 | ribonuclease HIII | |||
| 3460 | AAA family ATPase | |||
| 3465 | R | Mbo143ORF3380P (96% identity) | GCATC | MboVK12ORF3470P |
| 3470 | M | M1.Mbos193ORF3440P (100% identity) | GCATC | M1.MboVK12ORF3470P |
| 3475 | M | M2.MbosMb1ORF3285P (100% identity) | GCATC | M2.MboVK12ORF3470P |
| 3480 | 30S ribosomal protein S16 | |||
| 3690 | YigZ family protein | |||
| ??? | R | R2.MboVK8ORF3590P (76% identity) | GANTC | R2.MboVK12ORF3705P |
| 3705 | M | M.Mbos193ORF3690P (99% identity) | GANTC | M.MboVK12ORF3705P |
| 3710 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 795 | IS30 family transposase | |||
| 800 | R | MboAR4ORF825P (99% identity) | MboVK12ORF805P | |
| 805 | M | M1.Mbo147ORF805P (100% identity) | M1.MboVK12ORF805P | |
| ??? | M | M2.MboNADC59ORF875P (99% identity) | M2.MboVK12ORF805P | |
| ??? | M | M3.MboJ279ORF830P (99% identity) | M3.MboVK12ORF805P | |
| 835 | trigger factor | |||