Mycoplasma bovis Mb287 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Mycoplasma bovis Mb287 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 1,127,048 bp
GenBank #: CP058453
REBASE acronym: Mbo287
Org_num: 48463
All begin HYE12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4280 | IS3 family transposase | |||
| 4285 | S | S3.MboVK22ORF1020P (100% identity) | S4.Mbo287ORF1075P | |
| 4290 | ATP-binding protein | |||
| 4295 | S | S2.MbosMb1ORF1005P (25% identity) | S3.Mbo287ORF1075P | |
| 4300 | transposase | |||
| 4305 | S | S3.MboRM16ORF1000P (70% identity) | S2.Mbo287ORF1075P | |
| 1085 | site-specific integrase | |||
| 1080 | R | MbosMb1ORF1005P (80% identity) | Mbo287ORF1075P | |
| 4310 | IS3 family transposase | |||
| 4315 | type I restriction endonuclease | |||
| 4320 | S | S1.MboJ6ORF1160P (64% identity) | S1.Mbo287ORF1075P | |
| 1075 | M | M.MbosMb1ORF1005P (100% identity) | M.Mbo287ORF1075P | |
| 1070 | 333 aa hypothetical protein | |||
| 2880 | S8 family peptidase | |||
| 4880 | R | MbosMb1ORF4380P (100% identity) | Mbo287ORF4885P | |
| 4885 | M | M.MbosMb1ORF4380P (100% identity) | M.Mbo287ORF4885P | |
| 4890 | S | S1.MboXBY01ORFLP (100% identity) | S1.Mbo287ORF4885P | |
| 4895 | S | S3.MbosMb1ORF4380P (100% identity) | S2.Mbo287ORF4885P | |
| 4900 | S | S3.MboXBY01ORFLP (100% identity) | S3.Mbo287ORF4885P | |
| 4905 | tyrosine-type recombinase/integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3360 | AAA family ATPase | |||
| ??? | R | R1.MbosMb1ORF3285P (100% identity) | R1.Mbo287ORF3380P | |
| 4420 | IS3 family transposase | |||
| 3375 | R | Mbo49ORF4980P (100% identity) | GCATC | R2.Mbo287ORF3380P |
| 3380 | M | M1.MbosMb1ORF3285P (100% identity) | GCATC | M1.Mbo287ORF3380P |
| 3385 | M | M2.Mbo15527ORF4300P (99% identity) | M2.Mbo287ORF3380P | |
| 3300 | IS30 family transposase | |||
| 3605 | YigZ family protein | |||
| 3615 | R | MbosMb1ORF3525P (100% identity) | GANTC | Mbo287ORF3620P |
| 3620 | M | M.MbosMb1ORF3525P (100% identity) | GANTC | M.Mbo287ORF3620P |
| 4445 | IS3 family transposase | |||
| 4585 | 83 aa hypothetical protein | |||
| 4590 | M | M.MbosMb1ORF5230P (100% identity) | M.Mbo287ORF4590P | |
| 4595 | DEAD/DEAH box helicase | |||
| 3080 | ribonuclease HIII | |||
| 3075 | M | M.Mbos184ORF3155P (100% identity) | RCATGY | M.Mbo287ORF3075P |
| 4845 | 103 aa hypothetical protein | |||
| 2625 | variable surface lipoprotein | |||
| 2620 | M | M.MboXBY01ORFBP (100% identity) | GATC | M.Mbo287ORF2620P |
| 2615 | 30S ribosomal protein S2 | |||
| 5030 | HNH endonuclease | |||
| ??? | M | M.MboT10ORFGP (100% identity) | M.Mbo287ORF5035P | |
| 5045 | 63 aa hypothetical protein | |||
| 2205 | excinuclease ABC subunit UvrB | |||
| 2200 | M | M.MbosMb1ORF2105P (100% identity) | M.Mbo287ORF2200P | |
| 2195 | 150 aa hypothetical protein | |||
| 1710 | BspA family leucine-rich repeat surface protein | |||
| 1705 | R | MboRM16ORF1695P (100% identity) | CTAG | Mbo287ORF1700P |
| 1700 | M | M.MbosMb1ORF1625P (100% identity) | CTAG | M.Mbo287ORF1700P |
| 1695 | DNA polymerase III subunit delta | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3500 | Fic family protein | |||
| ??? | M | M1.Mbo108ORF3525P (94% identity) | M.Mbo287ORF3505P | |
| 4440 | IS3 family transposase | |||
| 4825 | 140 aa hypothetical protein | |||
| 775 | R | MbosMb1ORF815P (100% identity) | Mbo287ORF780P | |
| 780 | M | M1.MboNX114ORF860P (100% identity) | YAATC | M1.Mbo287ORF780P |
| ??? | M | M2.MbosMb1ORF815P (99% identity) | M2.Mbo287ORF780P | |
| 800 | M | M3.Mbo274ORF810P (99% identity) | M3.Mbo287ORF780P | |
| 805 | trigger factor | |||