Mycoplasma bovis Mb1 |
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Putative Mycoplasma bovis Mb1 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 1,092,872 bp
GenBank #: CP058448
REBASE acronym: MbosMb1
Org_num: 48399
All begin HYE17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2795 | S8 family peptidase | |||
| 4375 | R | MboXBY01ORFLP (100% identity) | MbosMb1ORF4380P | |
| 4380 | M | M.MboXBY01ORFLP (100% identity) | M.MbosMb1ORF4380P | |
| 4385 | S | S1.MboNX114ORF1290P (100% identity) | S1.MbosMb1ORF4380P | |
| 4390 | S | S2.MboVK22ORF4740P (100% identity) | S2.MbosMb1ORF4380P | |
| 4395 | S | S2.MboXBY01ORFLP (100% identity) | S3.MbosMb1ORF4380P | |
| 4400 | tyrosine-type recombinase/integrase | |||
| 4865 | IS3 family transposase | |||
| 4870 | S | S3.MboJ81ORF3310P (95% identity) | S3.MbosMb1ORF1005P | |
| 4875 | ATP-binding protein | |||
| 4880 | S | S2.MboJ279ORF3710P (100% identity) | S2.MbosMb1ORF1005P | |
| 1020 | site-specific integrase | |||
| 1015 | R | MboXBY01ORFJP (100% identity) | MbosMb1ORF1005P | |
| 4885 | S | S3.MboVK22ORF1020P (69% identity) | S1.MbosMb1ORF1005P | |
| 1005 | M | M.MboVK22ORF1020P (100% identity) | M.MbosMb1ORF1005P | |
| 4890 | 333 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2985 | ribonuclease HIII | |||
| 2980 | M | M.Mbos180ORF2985P (100% identity) | CATG | M.MbosMb1ORF2980P |
| 2975 | 85 aa hypothetical protein | |||
| 4460 | IS3 family transposase | |||
| 2525 | M | M.MboVK32ORF2615P (88% identity) | M.MbosMb1ORF2525P | |
| 4465 | IS30-like element ISMbov1 family transposase | |||
| 4565 | HNH endonuclease | |||
| ??? | M | M.MboXBY01ORFKP (100% identity) | CG | M.MbosMb1ORF4570P |
| 4580 | 73 aa hypothetical protein | |||
| 2110 | excinuclease ABC subunit UvrB | |||
| 2105 | M | M.Mbos194ORF2155P (100% identity) | M.MbosMb1ORF2105P | |
| 2100 | 150 aa hypothetical protein | |||
| 1635 | BspA family leucine-rich repeat surface protein | |||
| 1630 | R | Mbos194ORF1660P (100% identity) | CTAG | MbosMb1ORF1625P |
| 1625 | M | M.Mbos194ORF1660P (100% identity) | CTAG | M.MbosMb1ORF1625P |
| 1620 | DNA polymerase III subunit delta | |||
| 3275 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3280 | R | Mbo147ORF3445P (91% identity) | MbosMb1ORF3290P | |
| ??? | DNA adenine methylase | |||
| 3290 | M | M2.Mbos182ORF3390P (100% identity) | M.MbosMb1ORF3290P | |
| 3295 | 30S ribosomal protein S16 | |||
| 5025 | AAA family ATPase | |||
| ??? | R | R2.Mbos175ORF3305P (100% identity) | R1.MbosMb1ORF3285P | |
| 5040 | IS3 family transposase | |||
| 5045 | R | R1.Mbos175ORF3305P (100% identity) | GCATC | R2.MbosMb1ORF3285P |
| 3285 | M | M1.Mbos175ORF3305P (100% identity) | GCATC | M1.MbosMb1ORF3285P |
| 3290 | M | M2.Mbos194ORF3335P (100% identity) | GCATC | M2.MbosMb1ORF3285P |
| 3295 | 30S ribosomal protein S16 | |||
| 3510 | YigZ family protein | |||
| 3520 | R | MboVK22ORF3605P (100% identity) | GANTC | MbosMb1ORF3525P |
| 3525 | M | M.Mbos175ORF3540P (100% identity) | GANTC | M.MbosMb1ORF3525P |
| 5085 | IS3 family transposase | |||
| 5225 | 83 aa hypothetical protein | |||
| 5230 | M | M.Mbo287ORF4590P (100% identity) | M.MbosMb1ORF5230P | |
| 5235 | DEAD/DEAH box helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4300 | 150 aa hypothetical protein | |||
| 810 | R | MboVK16ORF795P (100% identity) | MbosMb1ORF815P | |
| ??? | M | M1.MboC72ORF830P (100% identity) | YAATC | M1.MbosMb1ORF815P |
| ??? | M | M2.MboVK6ORF790P (99% identity) | M2.MbosMb1ORF815P | |
| 825 | M | M3.Mbo141ORF795P (99% identity) | M3.MbosMb1ORF815P | |
| 830 | trigger factor | |||
| 3405 | Fic family protein | |||
| 3410 | M | M1.Mbo51ORF3560P (99% identity) | M1.MbosMb1ORF3410P | |
| ??? | M | M2.Mbo222ORF3390P (98% identity) | M2.MbosMb1ORF3410P | |
| 3430 | IS3 family transposase | |||
| 3405 | Fic family protein | |||
| ??? | M | M1.MboVK9ORF3520P (100% identity) | M.MbosMb1ORF5060P | |
| 5070 | site-specific DNA-methyltransferase | |||