Mycoplasma bovis Mb108 |
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Putative Mycoplasma bovis Mb108 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 986,426 bp
GenBank #: CP058437
REBASE acronym: Mbo108
Org_num: 48402
All begin HYE28_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1100 | 226 aa hypothetical protein | |||
| 1105 | M | M.Mbo209ORF1135P (99% identity) | M.Mbo108ORF1105P | |
| 1110 | S | S1.Mbos180ORF1000P (98% identity) | S.Mbo108ORF1105P | |
| 1115 | R | Mbos194ORF1025P (100% identity) | Mbo108ORF1105P | |
| 1120 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1740 | DNA polymerase III subunit delta | |||
| 1745 | M | M.Mbos188ORF1790P (100% identity) | CTAG | M.Mbo108ORF1745P |
| 1750 | R | MbosMb1ORF1625P (100% identity) | CTAG | Mbo108ORF1745P |
| 1755 | DUF285 domain-containing protein | |||
| 2235 | 150 aa hypothetical protein | |||
| 2240 | M | M.Mbos182ORF2215P (100% identity) | M.Mbo108ORF2240P | |
| 2245 | excinuclease ABC subunit UvrB | |||
| 2665 | 30S ribosomal protein S2 | |||
| 2670 | M | M.Mbo241ORF2585P (98% identity) | M.Mbo108ORF2670P | |
| 2675 | variable surface lipoprotein | |||
| 3110 | 85 aa hypothetical protein | |||
| 3115 | M | M.MboVK11ORF3200P (100% identity) | M.Mbo108ORF3115P | |
| 3120 | ribonuclease HIII | |||
| 3390 | AAA family ATPase | |||
| 3395 | R | MboVK23ORF3390P (92% identity) | GCATC | Mbo108ORF3400P |
| 3400 | M | M1.Mbos193ORF3440P (100% identity) | GCATC | M.Mbo108ORF3400P |
| 3405 | DNA adenine methylase | |||
| 3400 | DNA adenine methylase | |||
| 3405 | M | M2.Mbos194ORF3335P (88% identity) | M.Mbo108ORF3405P | |
| 3410 | 30S ribosomal protein S16 | |||
| 3630 | YigZ family protein | |||
| 3640 | R | R2.Mbo120ORF3610P (99% identity) | GANTC | R2.Mbo108ORF3645P |
| 3645 | M | M.MbosMb1ORF3525P (100% identity) | GANTC | M.Mbo108ORF3645P |
| 3650 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 785 | 88 aa hypothetical protein | |||
| 790 | R | MboVK8ORF795P (91% identity) | Mbo108ORF795P | |
| 795 | M | M1.Mbos182ORF790P (100% identity) | M1.Mbo108ORF795P | |
| ??? | M | M2.MboVK6ORF790P (100% identity) | M2.Mbo108ORF795P | |
| ??? | M | M3.Mbo56ORF875P (100% identity) | M3.Mbo108ORF795P | |
| 825 | trigger factor | |||
| 3520 | Fic family protein | |||
| ??? | M | M.Mbo287ORF3505P (94% identity) | M1.Mbo108ORF3525P | |
| ??? | M | M1.Mbo108ORF3525P (49% identity) | M2.Mbo108ORF3525P | |
| 3550 | IS3 family transposase | |||