Mycoplasma bovis Mb268 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Mycoplasma bovis Mb268 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 983,421 bp
GenBank #: CP058433
REBASE acronym: Mbo268
Org_num: 48458
All begin HYE32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1040 | 225 aa hypothetical protein | |||
| 1045 | M | M.Mbo231ORF985P (99% identity) | M.Mbo268ORF1045P | |
| 1050 | S | S1.MboVK25ORF1005P (49% identity) | S1.Mbo268ORF1045P | |
| 1055 | R | Mbos172ORF1010P (100% identity) | Mbo268ORF1045P | |
| 1060 | site-specific integrase | |||
| 1065 | S | S2.Mbo149ORF1055P (70% identity) | S2.Mbo268ORF1045P | |
| 1070 | S | S3.Mbo169ORF1125P (37% identity) | S3.Mbo268ORF1045P | |
| 1075 | DDE-type integrase/transposase/recombinase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1685 | DNA polymerase III subunit delta | |||
| 1690 | M | M.MbosMb1ORF1625P (100% identity) | CTAG | M.Mbo268ORF1690P |
| 1695 | R | Mbos185ORF1680P (100% identity) | CTAG | Mbo268ORF1690P |
| 1700 | DUF285 domain-containing protein | |||
| 2175 | 57 aa hypothetical protein | |||
| 2180 | M | M.MbosMb1ORF2105P (100% identity) | M.Mbo268ORF2180P | |
| 2185 | excinuclease ABC subunit UvrB | |||
| 2605 | 30S ribosomal protein S2 | |||
| 2610 | M | M.Mbos194ORF2595P (99% identity) | M.Mbo268ORF2610P | |
| 2615 | 435 aa hypothetical protein | |||
| 3055 | 62 aa hypothetical protein | |||
| 3060 | M | M.MbosMb1ORF2980P (100% identity) | M.Mbo268ORF3060P | |
| 3065 | ribonuclease HIII | |||
| 3335 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3340 | R | Mbo252ORF3225P (95% identity) | Mbo268ORF3350P | |
| ??? | DNA adenine methylase | |||
| 3350 | M | M.MbosMb1ORF3290P (100% identity) | M.Mbo268ORF3350P | |
| 3355 | 30S ribosomal protein S16 | |||
| 3340 | AlwI family type II restriction endonuclease | |||
| ??? | M | M.MbosMb1ORF3285P (100% identity) | M.Mbo268ORF3345P | |
| 3350 | DNA adenine methylase | |||
| 3565 | YigZ family protein | |||
| 3575 | R | R2.Mbo98ORF3650P (95% identity) | GANTC | R2.Mbo268ORF3580P |
| 3580 | M | M.Mbos194ORF3575P (100% identity) | GANTC | M.Mbo268ORF3580P |
| 3585 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 790 | IS30 family transposase | |||
| 795 | R | Mbos193ORF800P (99% identity) | Mbo268ORF800P | |
| 800 | M | M1.MboVK8ORF795P (98% identity) | M1.Mbo268ORF800P | |
| 805 | M | M2.MboVK25ORF780P (72% identity) | M2.Mbo268ORF800P | |
| 810 | 35 aa hypothetical protein | |||
| 815 | type III restriction endonuclease subunit M | |||
| 820 | M | M1.MboMJ1ORF825P (99% identity) | M3.Mbo268ORF800P | |
| 825 | trigger factor | |||
| 3460 | Fic family protein | |||
| ??? | M | M1.Mbos183ORF3410P (100% identity) | M1.Mbo268ORF3465P | |
| ??? | M | M2.MboVK9ORF3520P (100% identity) | M2.Mbo268ORF3465P | |
| 3485 | IS3 family transposase | |||