Mycoplasma bovis Mb216 |
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Putative Mycoplasma bovis Mb216 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 1,104,672 bp
GenBank #: CP058432
REBASE acronym: Mbo216
Org_num: 48442
All begin HYE33_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4795 | IS3 family transposase | |||
| 4800 | S | S3.MbosMb1ORF1005P (75% identity) | S3.Mbo216ORF1110P | |
| 4805 | ATP-binding protein | |||
| 4810 | S | S2.MboJ6ORF1160P (100% identity) | S2.Mbo216ORF1110P | |
| 1125 | site-specific integrase | |||
| 1120 | R | MbosMb1ORF1005P (89% identity) | Mbo216ORF1110P | |
| 4815 | 126 aa hypothetical protein | |||
| 4820 | S | S1.MboVK22ORF1020P (100% identity) | S1.Mbo216ORF1110P | |
| 1110 | M | M.MbosMb1ORF1005P (100% identity) | M.Mbo216ORF1110P | |
| 4825 | 310 aa hypothetical protein | |||
| 2965 | S8 family peptidase | |||
| 5300 | R | MbosMb1ORF4380P (100% identity) | Mbo216ORF5305P | |
| 5305 | M | M.MbosMb1ORF4380P (100% identity) | M.Mbo216ORF5305P | |
| 5310 | S | S1.MbosMb1ORF4380P (100% identity) | S1.Mbo216ORF5305P | |
| 5315 | S | S2.MbosMb1ORF4380P (100% identity) | S2.Mbo216ORF5305P | |
| 5320 | S | S3.MbosMb1ORF4380P (100% identity) | S3.Mbo216ORF5305P | |
| 5325 | tyrosine-type recombinase/integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4460 | HNH endonuclease | |||
| ??? | M | M.MboT10ORFGP (100% identity) | M.Mbo216ORF4465P | |
| 4475 | 63 aa hypothetical protein | |||
| 2250 | excinuclease ABC subunit UvrB | |||
| 2245 | M | M.MbosMb1ORF2105P (100% identity) | GCNGC | M.Mbo216ORF2245P |
| 2240 | 150 aa hypothetical protein | |||
| 1765 | BspA family leucine-rich repeat surface protein | |||
| 1760 | R | MbosMb1ORF1625P (100% identity) | CTAG | Mbo216ORF1755P |
| 1755 | M | M.MbosMb1ORF1625P (100% identity) | CTAG | M.Mbo216ORF1755P |
| 1750 | DNA polymerase III subunit delta | |||
| 4920 | AAA family ATPase | |||
| ??? | R | R1.MbosMb1ORF3285P (100% identity) | R1.Mbo216ORF3490P | |
| 4925 | IS3 family transposase | |||
| 3485 | R | R2.MbosMb1ORF3285P (100% identity) | GCATC | R2.Mbo216ORF3490P |
| 3490 | M | M1.MbosMb1ORF3285P (100% identity) | GCATC | M1.Mbo216ORF3490P |
| 3495 | M | M.Mbo157ORF3455P (100% identity) | GCATC | M2.Mbo216ORF3490P |
| 3500 | 30S ribosomal protein S16 | |||
| 3720 | YigZ family protein | |||
| 3730 | R | MbosMb1ORF3525P (100% identity) | GANTC | Mbo216ORF3735P |
| 3735 | M | M.MbosMb1ORF3525P (100% identity) | GANTC | M.Mbo216ORF3735P |
| 4955 | IS3 family transposase | |||
| 3175 | ribonuclease HIII | |||
| 3170 | M | M.Mbos184ORF3155P (100% identity) | RCATGY | M.Mbo216ORF3170P |
| 5240 | 103 aa hypothetical protein | |||
| 2690 | variable surface lipoprotein | |||
| 2685 | M | M.MboXBY01ORFBP (100% identity) | GATC | M.Mbo216ORF2685P |
| 2680 | 30S ribosomal protein S2 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 780 | alpha/beta hydrolase | |||
| 785 | R | Mbos182ORF790P (100% identity) | Mbo216ORF790P | |
| 790 | M | M1.MboVK24ORF805P (99% identity) | M1.Mbo216ORF790P | |
| 795 | M | M2.Mbo58ORF870P (99% identity) | M2.Mbo216ORF790P | |
| ??? | M | M3.Mbo143ORF790P (99% identity) | M3.Mbo216ORF790P | |
| 810 | trigger factor | |||
| 3610 | Fic family protein | |||
| ??? | M | M.MbosMb1ORF5060P (100% identity) | M.Mbo216ORF3615P | |
| 3630 | site-specific DNA-methyltransferase | |||
| 5195 | 140 aa hypothetical protein | |||
| 785 | R | MboXBY01ORFMP (100% identity) | Mbo216ORF5200P | |
| 790 | M | M1.MboT10ORFEP (98% identity) | YAATC | M1.Mbo216ORF5200P |
| ??? | M | M2.MbosMb1ORF815P (98% identity) | M2.Mbo216ORF5200P | |
| 795 | M | M2.Mbos193ORF800P (76% identity) | M3.Mbo216ORF5200P | |
| ??? | M | M2.Mbo191ORFGP (96% identity) | M4.Mbo216ORF5200P | |
| 810 | trigger factor | |||