Mycoplasma bovis Mb239 |
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Putative Mycoplasma bovis Mb239 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 1,062,432 bp
GenBank #: CP058418
REBASE acronym: Mbo239
Org_num: 48452
All begin HYE47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4560 | IS3 family transposase | |||
| 1050 | S | S1.MboC70ORF3525P (100% identity) | S.Mbo239ORF1050P | |
| 4565 | ATP-binding protein | |||
| 4565 | ATP-binding protein | |||
| 4570 | S | S2.Mbo196ORF990P (94% identity) | S2.Mbo239ORF1025P | |
| 1040 | site-specific integrase | |||
| 1035 | R | MbosMb1ORF1005P (100% identity) | Mbo239ORF1025P | |
| 4575 | S | S1.Mbo222ORF985P (100% identity) | S1.Mbo239ORF1025P | |
| 1025 | M | M.MbosMb1ORF1005P (67% identity) | M.Mbo239ORF1025BP | |
| 4580 | IS30-like element ISMbov1 family transposase | |||
| 4585 | M | M.MbosMb1ORF1005P (32% identity) | M.Mbo239ORF1025AP | |
| 1020 | 300 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3005 | ribonuclease HIII | |||
| 3000 | M | M.Mbos184ORF3155P (100% identity) | RCATGY | M.Mbo239ORF3000P |
| 4155 | 103 aa hypothetical protein | |||
| 2560 | variable surface lipoprotein | |||
| 2555 | M | M.MboXBY01ORFBP (91% identity) | M.Mbo239ORF2555P | |
| 4260 | IS30-like element ISMbov1 family transposase | |||
| 2150 | excinuclease ABC subunit UvrB | |||
| 2145 | M | M.MbosMb1ORF2105P (100% identity) | GCNGC | M.Mbo239ORF2145P |
| 4410 | 57 aa hypothetical protein | |||
| 1670 | BspA family leucine-rich repeat surface protein | |||
| 1665 | R | MbosMb1ORF1625P (100% identity) | CTAG | Mbo239ORF1660P |
| 1660 | M | M.MbosMb1ORF1625P (100% identity) | CTAG | M.Mbo239ORF1660P |
| 1655 | DNA polymerase III subunit delta | |||
| 3270 | AAA family ATPase | |||
| ??? | R | R1.MbosMb1ORF3285P (100% identity) | R1.Mbo239ORF3280P | |
| 4650 | IS3 family transposase | |||
| 4655 | R | R2.MbosMb1ORF3285P (100% identity) | GCATC | R2.Mbo239ORF3280P |
| 3280 | M | M1.MbosMb1ORF3285P (100% identity) | GCATC | M.Mbo239ORF3280P |
| 3285 | DNA adenine methylase | |||
| 3280 | DNA adenine methylase | |||
| 3285 | M | M2.MbosMb1ORF3285P (100% identity) | GCATC | M.Mbo239ORF3285P |
| 3290 | 30S ribosomal protein S16 | |||
| 3490 | YigZ family protein | |||
| 3500 | R | MbosMb1ORF3525P (100% identity) | GANTC | Mbo239ORF3505P |
| 3505 | M | M.MbosMb1ORF3525P (100% identity) | GANTC | M.Mbo239ORF3505P |
| 3510 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4115 | 150 aa hypothetical protein | |||
| 790 | R | MboXBY01ORFMP (100% identity) | Mbo239ORF795P | |
| 795 | M | M3.MboJ81ORF845P (99% identity) | M3.Mbo239ORF795P | |
| ??? | M | M2.MboN1ORF850P (100% identity) | M2.Mbo239ORF795P | |
| ??? | M | M3.MboNADC59ORF875P (100% identity) | M1.Mbo239ORF795P | |
| 810 | trigger factor | |||
| 3385 | Fic family protein | |||
| ??? | M | M1.Mbos188ORF3590P (99% identity) | M.Mbo239ORF3390P | |
| 3400 | 123 aa hypothetical protein | |||
| 3385 | Fic family protein | |||
| 3395 | M | M1.Mbo7VBGORF3865P (100% identity) | M1.Mbo239ORF3395P | |
| 4680 | M | M1.Mbos175ORF5165P (100% identity) | M2.Mbo239ORF3395P | |
| 3410 | IS3 family transposase | |||