Escherichia coli 1EC213 |
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Putative Escherichia coli 1EC213 RM systems
Ref: Prah,I. and Saito,R. unpublished
REBASE ref # 31805
| Sequence length: | GenBank #: | |
| Chromosome: | 4,746,359 bp | CP061101 |
| plasmid pEC213_1-OXA-181: | 95,832 bp | CP061102 |
| plasmid pEC213_2: | 92,656 bp | CP061103 |
REBASE acronym: EcoC213
Org_num: 46503
All begin IB009_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19535 | DUF262 domain-containing protein | |||
| 19540 | R | SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | EcoC213ORF19545P |
| 19545 | M | M.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | M.EcoC213ORF19545P |
| 19550 | S | S.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | S.EcoC213ORF19545P |
| 19555 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1780 | cell division protein DamX | |||
| 1785 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC213DamP |
| 1790 | ribulose-phosphate 3-epimerase | |||
| 2335 | DUF2556 family protein | |||
| 2340 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoC213ORF2340P |
| 2345 | DNA-binding transcriptional regulator Fis | |||
| 5665 | PerC family transcriptional regulator | |||
| 5670 | M | M.Eco595ORF8575P (99% identity) | GATC | M.EcoC213ORF5670P |
| 5675 | LexA family transcriptional regulator | |||
| 5850 | 257 aa hypothetical protein | |||
| 5855 | M | M.SflSTLE1ORF5615P (100% identity) | M.EcoC213ORF5855P | |
| 5860 | R | Sso8033ORF3755P (100% identity) | EcoC213ORF5855P | |
| 5865 | 121 aa hypothetical protein | |||
| 9140 | phosphohydrolase | |||
| 9145 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoC213DcmP |
| 9150 | V | V.SflSTLE1DcmP (100% identity) | V.EcoC213DcmP | |
| 9155 | drug/metabolite exporter YedA | |||
| 15320 | replication endonuclease | |||
| 15325 | M | M.EmaE2C08ORF22970P (99% identity) | GATC | M.EcoC213ORF15325P |
| 15330 | DUF3850 domain-containing protein | |||
| plasmid pEC213_1-OXA-181 | ||||
| 23305 | 73 aa hypothetical protein | |||
| 23310 | M | M.SflN92ORF24820P (100% identity) | M.EcoC213ORF23310P | |
| 23315 | 101 aa hypothetical protein | |||
| plasmid pEC213_2 | ||||
| 23805 | 226 aa hypothetical protein | |||
| 23810 | M | M.EcoJS316ORF22690P (99% identity) | M.EcoC213ORF23810P | |
| 23815 | glutamine--tRNA ligase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19555 | endoribonuclease SymE | |||
| 19560 | R | EcoCase1GmrSDP (100% identity) | EcoC213GmrDP | |
| 19565 | DUF1127 domain-containing protein | |||