Escherichia coli 19 |
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Putative Escherichia coli 19 RM systems
Ref: Biggel,M. et al. Nat Commun 11 (1), 5968 (2020)
REBASE ref # 31804
| Sequence length: | GenBank #: | |
| Chromosome: | 5,076,139 bp | CP048853 |
| plasmid p19-Pyelo_1: | 123,784 bp | CP048854 |
REBASE acronym: Ecos19
Org_num: 46501
All begin G4272_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1690 | cell division protein DamX | |||
| 1695 | M | M.SspPIBDamP (100% identity) | GATC | M.Ecos19DamP |
| 1700 | ribulose-phosphate 3-epimerase | |||
| 2290 | DUF2556 domain-containing protein | |||
| 2295 | M | M.EcoYP3ORF2640P (100% identity) | ATGCAT | M.Ecos19ORF2295P |
| 2300 | DNA-binding transcriptional regulator Fis | |||
| 9745 | phosphohydrolase | |||
| 9750 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Ecos19DcmP |
| 9755 | V | V.EcosC25DcmP (100% identity) | V.Ecos19DcmP | |
| 9760 | drug/metabolite exporter YedA | |||
| 16650 | 71 aa hypothetical protein | |||
| 16655 | M | M.Sen21974ORF23385P (100% identity) | M.Ecos19ORF16655P | |
| 16660 | 145 aa hypothetical protein | |||
| 20230 | HNH endonuclease | |||
| 20235 | R | EcoXJ61ORF19805P (100% identity) | Ecos19ORF20235P | |
| 20240 | 100 aa hypothetical protein | |||
| 20615 | 174 aa hypothetical protein | |||
| 20620 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.Ecos19ORF20620P |
| 20625 | histidine kinase | |||
| 20630 | 607 aa hypothetical protein | |||
| 20635 | R | Ecos132ORF20470P (100% identity) | Ecos19ORF20635P | |
| 20640 | 97 aa hypothetical protein | |||
| 21370 | 211 aa hypothetical protein | |||
| 21375 | R | Mmo12289ORF1444P (100% identity) | GCGCGC | Ecos19ORF21380P |
| 21380 | M | M.KquU41ORF24735P (100% identity) | GCGCGC | M.Ecos19ORF21380P |
| 21385 | V | V.Kpn22265ORF23705P (99% identity) | V.Ecos19ORF21380P | |
| 21390 | conjugal transfer protein TraD | |||
| plasmid p19-Pyelo_1 | ||||
| 24845 | 73 aa hypothetical protein | |||
| 24850 | M | M.Ecos69ORF26765P (100% identity) | M.Ecos19ORF24850P | |
| 24855 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20240 | 100 aa hypothetical protein | |||
| 20245 | R | EcoXJ61ORF19820P (100% identity) | GAGCC | Ecos19ORF20250P |
| 20250 | M | M.EcoMN067ORF25380P (100% identity) | GAGCC | M.Ecos19ORF20250P |
| 20255 | DEAD/DEAH box helicase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13580 | NinE family protein | |||
| 13585 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Ecos19ORF13585P |
| 13590 | recombination protein NinB | |||