Escherichia coli US31 |
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Putative Escherichia coli US31 RM systems
Ref: Biggel,M. et al. Nat Commun 11 (1), 5968 (2020)
REBASE ref # 31804
| Sequence length: | GenBank #: | |
| Chromosome: | 5,201,875 bp | CP048857 |
| plasmid pUS31_1: | 113,819 bp | CP048858 |
REBASE acronym: EcoUS31
Org_num: 46811
All begin G4275_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2935 | endoribonuclease SymE | |||
| 2940 | S | S.EcoC1113ORF10005P (100% identity) | AAGNNNNNNNRTDCC | S.EcoUS31ORF2945P |
| 2945 | M | M.SspS13ORF3945P (100% identity) | AAGNNNNNNNRTDCC | M.EcoUS31ORF2945P |
| 2950 | R | SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | EcoUS31ORF2945P |
| 2955 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15 | DUF3850 domain-containing protein | |||
| 20 | M | M.SflFF35ORF20P (100% identity) | M.EcoUS31ORF20P | |
| 25 | 330 aa hypothetical protein | |||
| 9960 | TrmB family transcriptional regulator | |||
| 9965 | M | M.EcoC1113ORF2895P (100% identity) | M.EcoUS31ORF9965P | |
| 9985 | tellurite resistance protein | |||
| 13620 | drug/metabolite exporter YedA | |||
| 13625 | V | V.EcosC25DcmP (100% identity) | V.EcoUS31DcmP | |
| 13630 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoUS31DcmP |
| 13635 | phosphohydrolase | |||
| 15445 | DUF1737 domain-containing protein | |||
| 15450 | S | S.EcoR9ORF14070P (99% identity) | S.EcoUS31ORF15455P | |
| 15455 | RM | EcoC1113ORF23080P (100% identity) | EcoUS31ORF15455P | |
| 15460 | BcpO-related WXXGXW repeat protein | |||
| 21445 | DNA-binding transcriptional regulator Fis | |||
| 21450 | M | M.SflC32ORFAP (100% identity) | ATGCAT | M.EcoUS31ORF21450P |
| 21455 | DUF2556 domain-containing protein | |||
| 22045 | ribulose-phosphate 3-epimerase | |||
| 22050 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoUS31DamP |
| 22055 | cell division protein DamX | |||
| plasmid pUS31_1 | ||||
| 25620 | 73 aa hypothetical protein | |||
| 25625 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoUS31ORF25625P |
| 25630 | 102 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2925 | 26 aa hypothetical protein | |||
| 2930 | R | Eho218GmrDP (97% identity) | EcoUS31GmrDP | |
| 2935 | endoribonuclease SymE | |||