Escherichia coli 78-Pyelo |
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Putative Escherichia coli 78-Pyelo RM systems
Ref: Biggel,M. et al. Nat Commun 11 (1), 5968 (2020)
REBASE ref # 31804
| Sequence length: | GenBank #: | |
| Chromosome: | 5,192,390 bp | CP048867 |
| plasmid p78-Pyelo_1: | 179,302 bp | CP048868 |
| plasmid p78-Pyelo_2: | 65,184 bp | CP048869 |
REBASE acronym: Eco78P
Org_num: 46516
All begin G4280_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20845 | restriction endonuclease | |||
| ??? | M | M.EcoSC054ORF4200P (100% identity) | GGYANNNNNGTNG | M.Eco78PORF20850P |
| 20855 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.Eco78PORF20850P |
| 20860 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | Eco78PORF20850P |
| 20865 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1945 | cell division protein DamX | |||
| 1950 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco78PDamP |
| 1955 | ribulose-phosphate 3-epimerase | |||
| 2545 | DUF2556 domain-containing protein | |||
| 2550 | M | M.Ecos19ORF2295P (100% identity) | ATGCAT | M.Eco78PORF2550P |
| 2555 | DNA-binding transcriptional regulator Fis | |||
| 6455 | 344 aa hypothetical protein | |||
| 6460 | R | EcoS22ECORF14420P (100% identity) | Eco78PORF6465P | |
| 6465 | M | M.EcoT040ORF14860P (97% identity) | M.Eco78PORF6465P | |
| 6470 | tyrosine-type recombinase/integrase | |||
| 7055 | serine/threonine protein phosphatase | |||
| 7060 | M | M.Esp911AORF3194P (100% identity) | M.Eco78PORF7060P | |
| 7065 | PerC family transcriptional regulator | |||
| 10505 | phosphohydrolase | |||
| 10510 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco78PDcmP |
| 10515 | V | V.SflC32DcmP (74% identity) | V.Eco78PDcmP | |
| 10520 | drug/metabolite exporter YedA | |||
| 13760 | DUF3927 domain-containing protein | |||
| 13775 | M | M.Spn7978ORF3515P (100% identity) | A | M.Eco78PORF13775P |
| 13780 | TrmB family transcriptional regulator | |||
| 22125 | transposase | |||
| 22130 | R | SflFF80ORF21000P (100% identity) | YGGCCR | Eco78PORF22135P |
| 22135 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.Eco78PORF22135P |
| 22140 | transposase | |||
| 22810 | DUF1804 family protein | |||
| 22815 | M | M.EspP049ORF3912P (100% identity) | M.Eco78PORF22815P | |
| 22820 | phage terminase large subunit | |||
| 23340 | phage lysis protein EssD | |||
| 23345 | M | M.Sso63633ORF22290P (100% identity) | M.Eco78PORF23345P | |
| 23350 | 67 aa hypothetical protein | |||
| 23380 | LexA family transcriptional regulator | |||
| 23385 | M | M.EcoSCU484ORF22615P (100% identity) | GATC | M.Eco78PORF23385P |
| 23390 | PerC family transcriptional regulator | |||
| 23440 | Eae protein | |||
| 23445 | M | M.EcoR44ORF23150P (99% identity) | M.Eco78PORF23445P | |
| 23450 | ead/Ea22-like family protein | |||
| plasmid p78-Pyelo_1 | ||||
| 26185 | 73 aa hypothetical protein | |||
| 26190 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco78PORF26190P |
| 26195 | 102 aa hypothetical protein | |||
| plasmid p78-Pyelo_2 | ||||
| 26480 | 102 aa hypothetical protein | |||
| 26485 | M | M.EcosB2CORFHP (100% identity) | M.Eco78PORF26485P | |
| 26490 | 73 aa hypothetical protein | |||