Acidithiobacillus ferrivorans XJFY6S-08 |
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Putative Acidithiobacillus ferrivorans XJFY6S-08 RM systems
Ref: Yan,L. and Ni,Y. unpublished
REBASE ref # 31615
Complete sequence: 3,161,380 bp
GenBank #: CP059488
REBASE acronym: Afe6S08
Org_num: 46033
All begin H2515_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4390 | virulence RhuM family protein | |||
| 4395 | R | Pfu818ORFAP (86% identity) | Afe6S08ORF4395P | |
| 4400 | transcriptional regulator | |||
| 12320 | type II toxin-antitoxin system PemK/MazF family | |||
| 12325 | R | AfeSS3ORF668P (99% identity) | Afe6S08ORF12365P | |
| 12330 | virulence protein RhuM/Fic/DOC family protein | |||
| 12335 | 73 aa hypothetical protein | |||
| 12340 | 45 aa hypothetical protein | |||
| 12345 | AAA family ATPase | |||
| 12350 | 492 aa hypothetical protein | |||
| 12355 | S | S.AfeSS3ORF668P (63% identity) | S2.Afe6S08ORF12365P | |
| 12360 | S | S.Ego125ORFGP (26% identity) | S1.Afe6S08ORF12365P | |
| 12365 | M | M.AfeSS3ORF668P (99% identity) | M.Afe6S08ORF12365P | |
| 12370 | bifunctional YncE family protein/alkaline | |||
| 13705 | YqaE/Pmp3 family membrane protein | |||
| 13710 | R | AfeSS3ORF301P (90% identity) | Afe6S08ORF13725P | |
| 13715 | DNA binding domain-containing protein | |||
| 13720 | S | S.Pag2AORF2631P (35% identity) | S.Afe6S08ORF13725P | |
| 13725 | M | M.AfeSS3ORF301P (92% identity) | M.Afe6S08ORF13725P | |
| 13730 | single-stranded DNA-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1180 | 85 aa hypothetical protein | |||
| 1185 | M | M.Asp221ORFOP (81% identity) | M.Afe6S08ORF1185P | |
| 1190 | 123 aa hypothetical protein | |||
| 1255 | 293 aa hypothetical protein | |||
| 1260 | RM | Afe5721ORF40076P (70% identity) | Afe6S08ORF1260P | |
| 1265 | 70 aa hypothetical protein | |||
| 9070 | type II toxin-antitoxin system YafQ family | |||
| 9080 | M | M.Xca1606ORF3215P (79% identity) | M.Afe6S08ORF9080P | |
| 9085 | single-stranded DNA-binding protein | |||
| 9085 | single-stranded DNA-binding protein | |||
| 9090 | M | M.AthLicORFLP (93% identity) | M.Afe6S08ORF9090P | |
| 9095 | 399 aa hypothetical protein | |||
| 10775 | 52 aa hypothetical protein | |||
| 10780 | M | M.Afe5721ORF10791P (94% identity) | M.Afe6S08ORF10780P | |
| 10785 | 166 aa hypothetical protein | |||
| 10850 | 403 aa hypothetical protein | |||
| 10855 | M | M.AspAMDORF6545P (38% identity) | M.Afe6S08ORF10855P | |
| 10860 | 263 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5585 | protein translocase subunit SecF | |||
| 5595 | R | AfeSS3ORF2181P (94% identity) | Afe6S08ORF5605P | |
| 5600 | addiction module protein | |||
| 5605 | M | M.AfeSS3ORF2181P (83% identity) | M.Afe6S08ORF5605P | |
| 5610 | stem cell self-renewal protein Piwi | |||
| 6745 | macro domain-containing protein | |||
| 6750 | M | M.Ski73ORF350P (75% identity) | M.Afe6S08ORF6750P | |
| 6755 | 54 aa hypothetical protein | |||
| 6760 | 61 aa hypothetical protein | |||
| 6765 | R | Afe5721ORF10987P (98% identity) | Afe6S08ORF6750P | |
| 6770 | phosphomethylpyrimidine synthase ThiC | |||