Synechococcus species CBW1004 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Synechococcus species CBW1004 RM systems
Ref: Fucich,D. et al. unpublished
REBASE ref # 32466
Complete sequence: 3,672,318 bp
GenBank #: CP060397
REBASE acronym: Ssp1004
Org_num: 49534
All begin H8F25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4280 | transposase | |||
| 4285 | M | M.SspLA31ORF1950P (83% identity) | M.Ssp1004ORF4285P | |
| 4290 | 57 aa hypothetical protein | |||
| 6980 | 66 aa hypothetical protein | |||
| 6985 | M | M.Ssp9902ORF468P (78% identity) | M.Ssp1004ORF6985P | |
| 6990 | S | S.Sca17387ORF35000P (35% identity) | S.Ssp1004ORF6985P | |
| 6995 | R | Ssp9902ORF468P (83% identity) | Ssp1004ORF6985P | |
| 7000 | M48 family metallopeptidase | |||
| 7860 | bifunctional hydroxymethylpyrimidine | |||
| 7865 | M | M.Ssp1006ORF9595P (82% identity) | M.Ssp1004ORF7865P | |
| 7870 | S | S.BglBBB01ORFBP (39% identity) | S.Ssp1004ORF7865P | |
| 7875 | IS5 family transposase | |||
| 7880 | 66 aa hypothetical protein | |||
| 7885 | 130 aa hypothetical protein | |||
| 7890 | 74 aa hypothetical protein | |||
| 7895 | type II toxin-antitoxin system VapC family | |||
| 7900 | R | Ssp1002ORF1870P (76% identity) | Ssp1004ORF7865P | |
| 7905 | 183 aa hypothetical protein | |||
| 11145 | 310 aa hypothetical protein | |||
| 11150 | R | Csp14ORF8935P (51% identity) | Ssp1004ORF11155P | |
| 11155 | M | M.Csp14ORF8935P (75% identity) | M.Ssp1004ORF11155P | |
| 11160 | S | S.RcaY262ORF8005P (47% identity) | S.Ssp1004ORF11155P | |
| 11165 | AAA family ATPase | |||
| 13260 | 45 aa hypothetical protein | |||
| 13265 | R | Csp14ORF15110P (76% identity) | Ssp1004ORF13300P | |
| 13270 | Uma2 family endonuclease | |||
| 13275 | HigA family addiction module antidote protein | |||
| 13280 | AbrB/MazE/SpoVT family DNA-binding | |||
| 13285 | type II toxin-antitoxin system VapC family | |||
| 13290 | type II toxin-antitoxin system HicB family | |||
| 13295 | type II toxin-antitoxin system HicA family | |||
| 13300 | M | M.Ssp1006ORF15865P (82% identity) | M.Ssp1004ORF13300P | |
| 13305 | S | S.SarUORFMP (16% identity) | S1.Ssp1004ORF13300P | |
| 13310 | IS5 family transposase | |||
| 13315 | S | S2.Ssp1006ORF15865P (29% identity) | S2.Ssp1004ORF13300P | |
| 13320 | IS5 family transposase | |||
| 13325 | S | S.MkoLM6ORF3736P (24% identity) | S3.Ssp1004ORF13300P | |
| 13330 | DUF4114 domain-containing protein | |||
| 14290 | 125 aa hypothetical protein | |||
| 14295 | M | M.GspM18ORF2872P (13% identity) | M.Ssp1004ORF14295AP | |
| 14305 | M | M.TspFBIII (72% identity) | M.Ssp1004ORF14295BP | |
| 14310 | type II toxin-antitoxin system RelE/ParE family | |||
| 14315 | HigA family addiction module antidote protein | |||
| 14320 | nucleotidyltransferase domain-containing | |||
| 14325 | HEPN domain-containing protein | |||
| 14330 | S | S.Uba827748ORFAP (38% identity) | S1.Ssp1004ORF14295P | |
| 14335 | DUF4268 domain-containing protein | |||
| 14340 | S | S3.Pki5BTORF17175P (75% identity) | S2.Ssp1004ORF14295P | |
| 14345 | R | TspFBIIIP (67% identity) | Ssp1004ORF14295P | |
| 14350 | 211 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1955 | DNA binding domain-containing protein | |||
| 1960 | RM | SspA1544ORF570P (55% identity) | Ssp1004ORF1960P | |
| 1965 | BREX system P-loop protein BrxC | |||
| 9190 | DUF2442 domain-containing protein | |||
| 9195 | RM | Cgr6307ORF239P (79% identity) | Ssp1004ORF9195P | |
| 9200 | DEAD/DEAH box helicase | |||