Diaphorobacter species JS3051 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Diaphorobacter species JS3051 RM systems
Ref: Li,T. et al. unpublished
REBASE ref # 31944
| Sequence length: | GenBank #: | |
| Chromosome: | 4,333,260 bp | CP065406 |
| plasmid pDCB1: | 108,781 bp | CP065407 |
| plasmid pDCB2: | 77,623 bp | CP065408 |
REBASE acronym: Dsp3051
Org_num: 47226
All begin I3K84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6595 | 47 aa hypothetical protein | |||
| 6600 | S | S.Rsp5965ORF12030P (44% identity) | S.Dsp3051ORF6600P | |
| 6605 | IS630 family transposase | |||
| 16550 | 65 aa hypothetical protein | |||
| 16555 | M | M1.PbaEC28ORF19080P (100% identity) | M1.Dsp3051ORF16555P | |
| 16560 | M | M2.DspMNS0ORF15675P (69% identity) | M2.Dsp3051ORF16555P | |
| 16565 | S | S.Tsp7712ORF29650P (61% identity) | S.Dsp3051ORF16555P | |
| 16570 | R | AspJSORF3609P (98% identity) | Dsp3051ORF16555P | |
| 16575 | chromosome segregation protein SMC | |||
| 19055 | IS630 family transposase | |||
| 19060 | S | S.Sen868ORFDP (26% identity) | S.Dsp3051ORF19065P | |
| 19065 | M | M.DspMNS0ORF7225P (99% identity) | M.Dsp3051ORF19065P | |
| 19070 | R | DspTPORF1194P (99% identity) | Dsp3051ORF19065P | |
| 19075 | 100 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7260 | DUF1010 domain-containing protein | |||
| 7265 | M | M.Psy74ORF3510P (68% identity) | M.Dsp3051ORF7265P | |
| 7270 | R | PspCOW77ORF2945P (64% identity) | Dsp3051ORF7265P | |
| 7275 | 75 aa hypothetical protein | |||
| 8905 | DNA binding domain-containing protein | |||
| 8910 | RM | DspMNS0ORF4350P (97% identity) | Dsp3051ORF8910P | |
| 8915 | chromosome partitioning protein ParA | |||
| 10180 | RES family NAD+ phosphorylase | |||
| 10185 | M | M.DspMNS0ORF3060P (100% identity) | M.Dsp3051ORF10185P | |
| 10190 | 70 aa hypothetical protein | |||
| 12020 | restriction endonuclease | |||
| 12025 | M | AspJSORF195BP (90% identity) | M.Dsp3051ORF12025P | |
| 12030 | DNA damage-inducible protein D | |||
| 12030 | DNA damage-inducible protein D | |||
| 12035 | RM | M.Dsp3050ORF1100P (100% identity) | Dsp3051ORF12035P | |
| 12040 | response regulator transcription factor | |||
| 19265 | DNA topoisomerase III | |||
| 19270 | M | M.DspMNS0ORF6715P (100% identity) | M.Dsp3051ORF19270P | |
| 19275 | 185 aa hypothetical protein | |||
| plasmid pDCB1 | ||||
| 21000 | phospholipase D family protein | |||
| 21005 | M | M.RpiH2Cu5ORF24150P (100% identity) | M.Dsp3051ORF21005P | |
| 21010 | 73 aa hypothetical protein | |||
| plasmid pDCB2 | ||||
| 21325 | OmpA family protein | |||
| 21330 | M | M.Xax9055ORFDP (88% identity) | M.Dsp3051ORF21330P | |
| 21335 | recombinase family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1310 | ATP-binding protein | |||
| 1315 | R | CnaX1ORF9025P (98% identity) | Dsp3051ORF1320P | |
| 1320 | M | M.AarEBORF2416P (94% identity) | M.Dsp3051ORF1320P | |
| 1325 | IS630 family transposase | |||
| 13605 | DUF350 domain-containing protein | |||
| 13610 | M | M.AspJSORF4096P (99% identity) | M.Dsp3051ORF13610P | |
| 13615 | DNA binding domain-containing protein | |||
| 13620 | R | Dsp3050ORF18655P (99% identity) | Dsp3051ORF13610P | |
| 13625 | polyamine aminopropyltransferase | |||
| 13695 | IS630 family transposase | |||
| 13700 | M | M.AspJSORF4081P (98% identity) | M.Dsp3051ORF13700P | |
| 13705 | AAA family ATPase | |||
| 13710 | DUF4276 family protein | |||
| 13715 | R | DspMNS0ORF18205P (100% identity) | Dsp3051ORF13700P | |
| 13720 | riboflavin synthase subunit alpha | |||
| 19835 | phosphoserine phosphatase SerB | |||
| ??? | R | PspCG912ORFBP (66% identity) | Dsp3051ORF19845P | |
| 19845 | M | M.MpaS2AMORF6515P (38% identity) | M.Dsp3051ORF19845P | |
| 19850 | 210 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1195 | DNA topoisomerase III | |||
| 1200 | R | PaeZPPH2GmrSDP (99% identity) | Dsp3051GmrSDP | |
| 1205 | 101 aa hypothetical protein | |||