Vibrio parahaemolyticus 20-082A3 |
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Putative Vibrio parahaemolyticus 20-082A3 RM systems
Ref: Han,J.E. and Kim,J.H. unpublished
REBASE ref # 30082
| Sequence length: | GenBank #: | |
| chromosome I: | 3,610,915 bp | CP065369 |
| chromosome II: | 1,802,312 bp | CP065370 |
| plasmid pVp-20-082A3B: | 67,093 bp | CP065372 |
REBASE acronym: Vna82A3
Org_num: 49802
All begin I5M77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 10300 | tyrosine-type recombinase/integrase | |||
| 10305 | M | M.Vpa82E4ORF3360P (100% identity) | M.Vna82A3ORF10305P | |
| 10310 | AAA family ATPase | |||
| 10315 | S | S.Vpa021D1ORF7705P (100% identity) | S.Vna82A3ORF10305P | |
| 10320 | R | Vpa82E4ORF3360P (100% identity) | Vna82A3ORF10305P | |
| 10325 | DUF2787 domain-containing protein | |||
| 11785 | 127 aa hypothetical protein | |||
| 11790 | M | M.Vpa82E4ORF1875P (100% identity) | M.Vna82A3ORF11790P | |
| 11795 | S | S.VpaSM4II (100% identity) | S.Vna82A3ORF11790P | |
| 11800 | 331 aa hypothetical protein | |||
| 14080 | M48 family metallopeptidase | |||
| 14085 | R | Vpa82E4ORF16820P (100% identity) | Vna82A3ORF11760P | |
| 14090 | AAA family ATPase | |||
| 14095 | S | S1.Vpa82E4ORF16820P (100% identity) | S1.Vna82A3ORF11760P | |
| 14100 | M | M2.Vpa82E4ORF16820P (100% identity) | M.Vna82A3ORF11760P | |
| 14105 | S | S2.Vpa82E4ORF16820P (100% identity) | S2.Vna82A3ORF11760P | |
| 14110 | tyrosine-type recombinase/integrase | |||
| 14125 | 127 aa hypothetical protein | |||
| 14130 | M | M.Vpa82E4ORF16790P (100% identity) | M.Vna82A3ORF14130P | |
| 14135 | S | S.Vpa82E4ORF16790P (100% identity) | S.Vna82A3ORF14130P | |
| 14140 | R | Vpa82E4ORF16790P (100% identity) | Vna82A3ORF14130P | |
| 14145 | 97 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 5355 | 84 aa hypothetical protein | |||
| 5360 | M | M.Vpa82E4ORF8310P (100% identity) | M.Vna82A3ORF5360P | |
| 5365 | phage tail tape measure protein | |||
| 11690 | DEAD/DEAH box helicase family protein | |||
| 11695 | M | M.VpaSM4ORFEP (94% identity) | M.Vna82A3ORF11695P | |
| 11700 | elongation factor Ts | |||
| 15715 | AAA family ATPase | |||
| 15720 | M | M.VphVPD14DamP (100% identity) | GATC | M.Vna82A3DamP |
| 15725 | ribulose-phosphate 3-epimerase | |||
| chromosome II | ||||
| 20285 | 759 aa hypothetical protein | |||
| 20290 | M | M.Vpa82E4ORF22855P (100% identity) | M.Vna82A3ORF20290P | |
| 20295 | 90 aa hypothetical protein | |||
| plasmid pVp-20-082A3B | ||||
| 26090 | IS5 family transposase | |||
| 26095 | M | M.VpaVP17ORF25320P (100% identity) | M.Vna82A3ORF26095P | |
| 26100 | 496 aa hypothetical protein | |||